Construct: ORF ccsbBroadEn_05528

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001738.1_s300c1, BRDN0000387729
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TICAM2 (353376)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 353376 TICAM2 toll like receptor adaptor ... NM_021649.7 100% 100%
2 human 100302736 TMED7-TICAM2 TMED7-TICAM2 readthrough NM_001164468.4 56.3% 53.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
774
ORF length:
705
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGGTATCGGG AAGTCTAAAA TAAATTCCTG CCCTCTTTCT CTCTCTTGGG
121GTAAAAGGCA CAGTGTGGAT ACAAGTCCAG GATATCATGA GTCAGATTCC AAGAAGTCTG
181AAGATCTATC CTTGTGTAAT GTTGCTGAGC ACAGCAATAC AACAGAGGGG CCAACAGGAA
241AGCAGGAGGG AGCTCAGAGC GTGGAAGAGA TGTTTGAAGA AGAAGCTGAA GAAGAGGTGT
301TCCTCAAATT TGTGATATTG CATGCAGAAG ATGACACAGA TGAAGCCCTC AGAGTCCAGA
361ATCTGCTACA AGATGACTTT GGTATCAAAC CCGGAATAAT CTTTGCTGAG ATGCCATGTG
421GCAGACAGCA TTTACAGAAT TTAGATGATG CTGTAAATGG GTCTGCATGG ACAATCTTAT
481TACTGACTGA AAACTTTTTA AGAGATACTT GGTGTAATTT CCAGTTCTAT ACGTCCCTAA
541TGAACTCCGT TAACAGGCAG CATAAATACA ACTCTGTTAT ACCCATGCGG CCCCTGAACA
601ATCCCCTTCC CCGAGAAAGG ACTCCCTTTG CCCTCCAAAC CATCAATGCC TTAGAGGAAG
661AAAGTCGTGG ATTTCCTACA CAAGTAGAAA GAATTTTTCA GGAGTCTGTG TATAAGACAC
721AACAAACTAT ATGGAAAGAG ACAAGAAATA TGGTACAAAG ACAATTTATT GCCTTGCCAA
781CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)