Construct: ORF ccsbBroadEn_05612
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF009156.1_s300c1, BRDN0000394710
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- GPR152 (390212)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 390212 | GPR152 | G protein-coupled receptor 152 | NM_206997.1 | 100% | 100% |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 1479
- ORF length:
- 1410
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG 61 TTGGCACCAT GGACACTACC ATGGAAGCTG ACCTGGGTGC CACTGGCCAC AGGCCCCGCA 121 CAGAGCTTGA TGATGAGGAC TCCTACCCCC AAGGTGGCTG GGACACGGTC TTCCTGGTGG 181 CCCTGCTGCT CCTTGGGCTG CCAGCCAATG GGTTGATGGC GTGGCTGGCC GGCTCCCAGG 241 CCCGGCATGG AGCTGGCACG CGTCTGGCGC TGCTCCTGCT CAGCCTGGCC CTCTCTGACT 301 TCTTGTTCCT GGCAGCAGCG GCCTTCCAGA TCCTAGAGAT CCGGCATGGG GGACACTGGC 361 CGCTGGGGAC AGCTGCCTGC CGCTTCTACT ACTTCCTATG GGGCGTGTCC TACTCCTCCG 421 GCCTCTTCCT GCTGGCCGCC CTCAGCCTCG ACCGCTGCCT GCTGGCGCTG TGCCCACACT 481 GGTACCCTGG GCACCGCCCA GTCCGCCTGC CCCTCTGGGT CTGCGCCGGT GTCTGGGTGC 541 TGGCCACACT CTTCAGCGTG CCCTGGCTGG TCTTCCCCGA GGCTGCCGTC TGGTGGTACG 601 ACCTGGTCAT CTGCCTGGAC TTCTGGGACA GCGAGGAGCT GTCGCTGAGG ATGCTGGAGG 661 TCCTGGGGGG CTTCCTGCCT TTCCTCCTGC TGCTCGTCTG CCACGTGCTC ACCCAGGCCA 721 CAGCCTGTCG CACCTGCCAC CGCCAACAGC AGCCCGCAGC CTGCCGGGGC TTCGCCCGTG 781 TGGCCAGGAC CATTCTGTCA GCCTATGTGG TCCTGAGGCT GCCCTACCAG CTGGCCCAGC 841 TGCTCTACCT GGCCTTCCTG TGGGACGTCT ACTCTGGCTA CCTGCTCTGG GAGGCCCTGG 901 TCTACTCCGA CTACCTGATC CTACTCAACA GCTGCCTCAG CCCCTTCCTC TGCCTCATGG 961 CCAGTGCCGA CCTCCGGACC CTGCTGCGCT CCGTGCTCTC GTCCTTCGCG GCAGCTCTCT 1021 GCGAGGAGCG GCCGGGCAGC TTCACGCCCA CTGAGCCACA GACCCAGCTA GATTCTGAGG 1081 GTCCAACTCT GCCAGAGCCG ATGGCAGAGG CCCAGTCACA GATGGATCCT GTGGCCCAGC 1141 CTCAGGTGAA CCCCACACTC CAGCCACGAT CGGATCCCAC AGCTCAGCCA CAGCTGAACC 1201 CTACGGCCCA GCCACAGTCG GATCCCACAG CCCAGCCACA GCTGAACCTC ATGGCCCAGC 1261 CACAGTCAGA TTCTGTGGCC CAGCCACAGG CAGACACTAA CGTCCAGACC CCTGCACCTG 1321 CTGCCAGTTC TGTGCCCAGT CCCTGTGATG AAGCTTCCCC AACCCCATCC TCGCATCCTA 1381 CCCCAGGGGC CCTTGAGGAC CCAGCCACAC CTCCTGCCTC TGAAGGAGAA AGCCCCAGCA 1441 GCACCCCGCC AGAGGCGGCC CCGGGCGCAG GCCCCACGTT GCCAACTTTC TTGTACAAAG 1501 Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac