Construct: ORF ccsbBroadEn_05683

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016582.1_s300c1, BRDN0000387643
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SPANXN4 (441525)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 441525 SPANXN4 SPANX family member N4 NM_001009613.3 100% 100%
2 human 441525 SPANXN4 SPANX family member N4 XM_017029543.1 62.4% 61.1% (many diffs)
3 human 441525 SPANXN4 SPANX family member N4 XM_017029544.1 61.7% 60.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
366
ORF length:
297
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAAGAGCCA ACTTCCAGCA CCAACGAGAA TAAAATGAAG AGCCCCTGTG
121AATCTAACAA AAGAAAAGTT GACAAGAAGA AGAAGAATCT GCACAGAGCC TCAGCCCCTG
181AACAGAGTTT GAAAGAGACA GAAAAAGCAA AATATCCAAC ATTAGTGTTT TACTGCAGGA
241AGAATAAGAA AAGAAATTCA AATCAACTGG AGAATAACCA GCCTACAGAG AGCTCCACTG
301ATCCAATCAA AGAGAAAGGA GACCTAGACA TATCTGCAGG ATCTCCACAG GATGGTGGGC
361AGAATTTGCC AACTTTCTTG TACAAAGTtg gcattataag aaagcattgc ttatcaattt
421gttgcaacga ac

Download FASTA (ORF) (Full)