Construct: ORF ccsbBroadEn_06070

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009187.1_s300c1, BRDN0000392505
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CYC1 (1537)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1537 CYC1 cytochrome c1 NM_001916.5 99.7% 99.6% 99T>G;226A>G
2 human 1537 CYC1 cytochrome c1 XM_024447072.1 81.7% 81.5% 0_1ins177;49A>G
3 human 1537 CYC1 cytochrome c1 XM_017013102.1 63.8% 56% (many diffs)
4 mouse 66445 Cyc1 cytochrome c-1 NM_025567.2 87.6% 90.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1041
ORF length:
975
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGCAGCTGCG GCTTCGCTTC GCGGGGTAGT GTTGGGCCCG CGGGGCGCGG
121GGCTCCCGGG CGCGCGTGCC CGGGGTCTGC TGTGCAGCGC GCGGCCCGGG CAGCTCCCGC
181TACGGACACC TCAGGCAGTG GCCTTGTCGT CGAAGTCTGG CCTTTCCCGA GGCCGGAAAG
241TGATGCTGTC AGCGCTGGGC ATGCTGGCGG CAGGGGGTGC GGGGCTGGCC GTGGCTCTGC
301ATTCGGCTGT GAGTGCCAGT GACCTGGAGC TGCACCCCCC CAGCTATCCG TGGTCTCACC
361GTGGCCTCCT CTCTTCCTTG GACCACACCA GCATCCGGAG GGGTTTCCAG GTATATAAGC
421AGGTGTGCGC CTCCTGCCAC AGCATGGACT TCGTGGCCTA CCGCCACCTG GTGGGCGTGT
481GCTACACGGA GGATGAAGCT AAGGAGCTGG CTGCGGAGGT GGAGGTTCAA GACGGCCCCA
541ATGAAGATGG GGAGATGTTC ATGCGGCCAG GGAAGCTGTT CGACTATTTC CCAAAACCAT
601ACCCCAACAG TGAGGCTGCT CGAGCTGCCA ACAACGGAGC ATTGCCCCCT GACCTCAGCT
661ACATCGTGCG AGCTAGGCAT GGTGGTGAGG ACTACGTCTT CTCCCTGCTC ACGGGCTACT
721GCGAGCCACC CACCGGGGTG TCACTGCGGG AAGGTCTCTA CTTCAACCCC TACTTTCCTG
781GCCAGGCCAT TGCCATGGCC CCTCCCATCT ACACAGATGT CTTAGAGTTT GACGATGGCA
841CCCCAGCTAC CATGTCCCAG ATAGCCAAGG ATGTGTGCAC CTTCCTGCGC TGGGCATCTG
901AGCCAGAGCA CGACCATCGA AAACGCATGG GGCTCAAGAT GTTGATGATG ATGGCTCTGC
961TGGTGCCCCT GGTCTACACC ATAAAGCGGC ACAAGTGGTC AGTCCTGAAG AGTCGGAAGC
1021TGGCATATCG GCCGCCCAAG TGCCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
1081attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)