Construct: ORF ccsbBroadEn_06207

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016858.1_s300c1, BRDN0000394574
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FGF6 (2251)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2251 FGF6 fibroblast growth factor 6 NM_020996.2 99.5% 100% 189C>G;366T>C;417T>C
2 human 2251 FGF6 fibroblast growth factor 6 XM_017018995.1 76.2% 69.2% (many diffs)
3 human 2251 FGF6 fibroblast growth factor 6 XM_017018996.1 72.5% 72.1% (many diffs)
4 mouse 14177 Fgf6 fibroblast growth factor 6 NM_010204.1 88.4% 93.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
693
ORF length:
624
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCCCTGGGA CAGAAACTGT TCATCACTAT GTCCCGGGGA GCAGGACGTC
121TGCAGGGCAC GCTGTGGGCT CTCGTCTTCC TAGGCATCCT AGTGGGCATG GTGGTGCCCT
181CGCCTGCAGG CACCCGTGCC AACAACACGC TGCTGGACTC GAGGGGCTGG GGCACCCTGC
241TGTCCAGGTC TCGCGCGGGG CTAGCTGGAG AGATTGCCGG GGTGAACTGG GAAAGTGGCT
301ATTTGGTGGG GATCAAGCGG CAGCGGAGGC TCTACTGCAA CGTGGGCATC GGCTTTCACC
361TCCAGGTGCT CCCCGACGGC CGGATCAGCG GGACCCACGA GGAGAACCCC TACAGCCTGC
421TGGAAATTTC CACCGTGGAG CGAGGCGTGG TGAGTCTCTT TGGAGTGAGA AGTGCCCTCT
481TCGTCGCCAT GAACAGTAAA GGAAGATTGT ACGCAACGCC CAGCTTCCAA GAAGAATGCA
541AGTTCAGAGA AACCCTCCTG CCCAACAATT ACAATGCCTA CGAGTCAGAC TTGTACCAAG
601GGACCTACAT TGCCCTGAGC AAATACGGAC GGGTAAAGCG GGGCAGCAAG GTGTCCCCGA
661TCATGACTGT CACTCATTTC CTTCCCAGGA TCTTGCCAAC TTTCTTGTAC AAAGTtggca
721ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)