Construct: ORF ccsbBroadEn_06664

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003408.1_s300c1, BRDN0000387152
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OAS2 (4939)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4939 OAS2 2'-5'-oligoadenylate synthe... NM_002535.3 99.9% 100% 753A>T
2 human 4939 OAS2 2'-5'-oligoadenylate synthe... NM_016817.3 95.4% 94.9% (many diffs)
3 human 4939 OAS2 2'-5'-oligoadenylate synthe... XR_001748725.2 40.1% (many diffs)
4 human 4939 OAS2 2'-5'-oligoadenylate synthe... NM_001032731.2 24.3% 22.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2127
ORF length:
2061
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG AAATGGGGAG TCCCAGCTGT CCTCGGTGCC TGCTCAGAAG CTGGGTTGGT
121TTATCCAGGA ATACCTGAAG CCCTACGAAG AATGTCAGAC ACTGATCGAC GAGATGGTGA
181ACACCATCTG TGACGTCCTG CAGGAACCCG AACAGTTCCC CCTGGTGCAG GGAGTGGCCA
241TAGGTGGCTC CTATGGACGG AAAACAGTCT TAAGAGGCAA CTCCGATGGT ACCCTTGTCC
301TCTTCTTCAG TGACTTAAAA CAATTCCAGG ATCAGAAGAG AAGCCAACGT GACATCCTCG
361ATAAAACTGG GGATAAGCTG AAGTTCTGTC TGTTCACGAA GTGGTTGAAA AACAATTTCG
421AGATCCAGAA GTCCCTTGAT GGGTTCACCA TCCAGGTGTT CACAAAAAAT CAGAGAATCT
481CTTTCGAGGT GCTGGCCGCC TTCAACGCTC TGAGCTTAAA TGATAATCCC AGCCCCTGGA
541TCTATCGAGA GCTCAAAAGA TCCTTGGATA AGACAAATGC CAGTCCTGGT GAGTTTGCAG
601TCTGCTTCAC TGAACTCCAG CAGAAGTTTT TTGACAACCG TCCTGGAAAA CTAAAGGATT
661TGATCCTCTT GATAAAGCAC TGGCATCAAC AGTGCCAGAA AAAAATCAAG GATTTACCCT
721CGCTGTCTCC GTATGCCCTG GAGCTGCTTA CGGTGTATGC CTGGGAACAG GGGTGCAGAA
781AAGACAACTT TGACATTGCT GAAGGCGTCA GAACCGTTCT GGAGCTGATC AAATGCCAGG
841AGAAGCTGTG TATCTATTGG ATGGTCAACT ACAACTTTGA AGATGAGACC ATCAGGAACA
901TCCTGCTGCA CCAGCTCCAA TCAGCGAGGC CAGTAATCTT GGATCCAGTT GACCCAACCA
961ATAATGTGAG TGGAGATAAA ATATGCTGGC AATGGCTGAA AAAAGAAGCT CAAACCTGGT
1021TGACTTCTCC CAACCTGGAT AATGAGTTAC CTGCACCATC TTGGAATGTT CTGCCTGCAC
1081CACTCTTCAC GACCCCAGGC CACCTTCTGG ATAAGTTCAT CAAGGAGTTT CTCCAGCCCA
1141ACAAATGCTT CCTAGAGCAG ATTGACAGTG CTGTTAACAT CATCCGTACA TTCCTTAAAG
1201AAAACTGCTT CCGACAATCA ACAGCCAAGA TCCAGATTGT CCGGGGAGGA TCAACCGCCA
1261AAGGCACAGC TCTGAAGACT GGCTCTGATG CCGATCTCGT CGTGTTCCAT AACTCACTTA
1321AAAGCTACAC CTCCCAAAAA AACGAGCGGC ACAAAATCGT CAAGGAAATC CATGAACAGC
1381TGAAAGCCTT TTGGAGGGAG AAGGAGGAGG AGCTTGAAGT CAGCTTTGAG CCTCCCAAGT
1441GGAAGGCTCC CAGGGTGCTG AGCTTCTCTC TGAAATCCAA AGTCCTCAAC GAAAGTGTCA
1501GCTTTGATGT GCTTCCTGCC TTTAATGCAC TGGGTCAGCT GAGTTCTGGC TCCACACCCA
1561GCCCCGAGGT TTATGCAGGG CTCATTGATC TGTATAAATC CTCGGACCTC CCGGGAGGAG
1621AGTTTTCTAC CTGTTTCACA GTCCTGCAGC GAAACTTCAT TCGCTCCCGG CCCACCAAAC
1681TAAAGGATTT AATTCGCCTG GTGAAGCACT GGTACAAAGA GTGTGAAAGG AAACTGAAGC
1741CAAAGGGGTC TTTGCCCCCA AAGTATGCCT TGGAGCTGCT CACCATCTAT GCCTGGGAGC
1801AGGGGAGTGG AGTGCCGGAT TTTGACACTG CAGAAGGTTT CCGGACAGTC CTGGAGCTGG
1861TCACACAATA TCAGCAGCTC TGCATCTTCT GGAAGGTCAA TTACAACTTT GAAGATGAGA
1921CCGTGAGGAA GTTTCTACTG AGCCAGTTGC AGAAAACCAG GCCTGTGATC TTGGACCCAG
1981CCGAACCCAC AGGTGACGTG GGTGGAGGGG ACCGTTGGTG TTGGCATCTT CTGGCAAAAG
2041AAGCAAAGGA ATGGTTATCC TCTCCCTGCT TCAAGGATGG GACTGGAAAC CCAATACCAC
2101CTTGGAAAGT GCCGGTAAAA GTCATCTACC CAACTTTCTT GTACAAAGTt ggcattataa
2161gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)