Construct: ORF ccsbBroadEn_06726

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012487.1_s300c1, BRDN0000387577
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PIGF (5281)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5281 PIGF phosphatidylinositol glycan... NM_173074.3 99.8% 100% 327A>G
2 human 5281 PIGF phosphatidylinositol glycan... XM_005264369.3 89.8% 88.8% (many diffs)
3 human 5281 PIGF phosphatidylinositol glycan... XM_011532908.3 87.5% 81.1% (many diffs)
4 human 5281 PIGF phosphatidylinositol glycan... NM_002643.4 85.5% 81.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
684
ORF length:
618
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA AGATAACGAT ATCAAGAGAC TACTGTATAC CCATCTTTTA TGCATATTTT
121CAATTATCCT AAGTGTCTTC ATTCCATCAC TCTTCTTGGA GAACTTCTCA ATATTGGAAA
181CACACTTGAC ATGGTTGTGC ATCTGTTCTG GTTTTGTAAC TGCTGTCAAT CTAGTACTAT
241ATTTAGTAGT GAAACCAAAT ACATCCTCTA AAAGAAGTTC ATTATCACAC AAGGTAACTG
301GATTTTTGAA ATGCTGTATC TACTTTCTTA TGTCTTGTTT CTCCTTTCAT GTAATTTTTG
361TTCTGTATGG AGCACCACTG ATAGAGTTGG CGTTGGAAAC ATTTTTATTT GCAGTTATTT
421TGTCTACTTT TACTACTGTG CCTTGCTTAT GTTTGTTAGG ACCAAACCTC AAAGCATGGC
481TAAGAGTGTT CAGTAGAAAT GGAGTTACAT CCATATGGGA GAATAGTCTC CAGATCACTA
541CAATTTCTAG CTTTGTAGGA GCATGGCTTG GAGCACTTCC TATTCCACTG GATTGGGAAA
601GACCATGGCA GATGACAGTA GAAAGAAAAC GTAGCACTTA TAGATCTCTC CATGTACCCT
661GCAGGGGGCT TGGTACTGTG AAATGCCCAA CTTTCTTGTA CAAAGTtggc attataagaa
721agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)