Construct: ORF ccsbBroadEn_06972

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013064.1_s300c1, BRDN0000392388
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC25A1 (6576)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6576 SLC25A1 solute carrier family 25 me... NM_005984.5 99.8% 99.6% 13C>G
2 human 6576 SLC25A1 solute carrier family 25 me... NM_001256534.2 94% 90% (many diffs)
3 human 6576 SLC25A1 solute carrier family 25 me... NM_001287387.2 66.8% 66.8% 0_1ins309
4 human 6576 SLC25A1 solute carrier family 25 me... NR_046298.2 46.6% (many diffs)
5 mouse 13358 Slc25a1 solute carrier family 25 (m... NM_153150.2 88.1% 93.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
999
ORF length:
933
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC CGCGCCCGGC GCCCCGCGCG CTCTGGCGGC CGCCGCGCCC GCGTCCGGGA
121AGGCCAAGCT GACGCACCCG GGGAAGGCGA TCCTGGCAGG CGGCCTGGCG GGTGGCATCG
181AGATCTGCAT CACCTTCCCC ACCGAGTACG TGAAGACGCA GCTGCAGCTG GACGAGCGCT
241CGCACCCGCC GCGGTACCGG GGCATCGGGG ACTGCGTGCG GCAGACGGTT CGCAGCCATG
301GCGTCCTGGG CCTGTACCGC GGCCTTAGCT CCCTGCTCTA CGGTTCCATC CCCAAGGCGG
361CCGTCAGGTT TGGAATGTTC GAGTTCCTCA GCAACCACAT GCGGGATGCC CAGGGACGGC
421TGGACAGCAC GCGTGGGCTG CTGTGCGGCC TGGGCGCTGG CGTGGCCGAG GCCGTGGTGG
481TCGTGTGCCC CATGGAGACC ATCAAGGTGA AGTTCATCCA CGACCAGACC TCCCCAAACC
541CCAAGTACAG AGGATTCTTC CACGGGGTTA GGGAGATTGT GCGGGAACAA GGGCTGAAGG
601GGACGTACCA GGGCCTCACA GCCACTGTCC TGAAGCAGGG CTCGAACCAG GCCATCCGCT
661TCTTCGTCAT GACCTCCCTG CGCAACTGGT ACCGAGGGGA CAACCCCAAC AAGCCCATGA
721ACCCTCTGAT CACTGGGGTC TTCGGAGCTA TTGCAGGCGC AGCCAGTGTC TTTGGAAACA
781CTCCTCTGGA TGTGATTAAG ACCCGGATGC AGGGCCTGGA GGCGCACAAA TACCGGAACA
841CGTGGGACTG CGGCTTGCAG ATCCTGAAGA AGGAGGGGCT CAAGGCATTC TACAAGGGCA
901CTGTCCCCCG CCTGGGCCGG GTCTGCCTGG ATGTGGCCAT AGTGTTTGTC ATCTATGATG
961AAGTGGTGAA GCTGCTCAAC AAAGTGTGGA AGACGGACTA CCCAACTTTC TTGTACAAAG
1021Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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