Construct: ORF ccsbBroadEn_07146

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008622.1_s300c1, BRDN0000385303
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF3 (7551)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7551 ZNF3 zinc finger protein 3 NM_001278284.2 99.8% 99.5% 427T>N;464T>N
2 human 7551 ZNF3 zinc finger protein 3 NM_001278287.2 99.8% 99.5% 427T>N;464T>N
3 human 7551 ZNF3 zinc finger protein 3 NM_001278290.1 99.8% 99.5% 427T>N;464T>N
4 human 7551 ZNF3 zinc finger protein 3 NM_001318135.2 99.8% 99.5% 427T>N;464T>N
5 human 7551 ZNF3 zinc finger protein 3 NM_001371211.1 99.8% 99.5% 427T>N;464T>N
6 human 7551 ZNF3 zinc finger protein 3 NM_001371212.1 99.8% 99.5% 427T>N;464T>N
7 human 7551 ZNF3 zinc finger protein 3 NM_001371213.1 99.8% 99.5% 427T>N;464T>N
8 human 7551 ZNF3 zinc finger protein 3 NM_001371214.1 99.8% 99.5% 427T>N;464T>N
9 human 7551 ZNF3 zinc finger protein 3 NM_032924.5 99.8% 99.5% 427T>N;464T>N
10 human 7551 ZNF3 zinc finger protein 3 NM_001362776.2 98.7% 98.4% 142_156del;442T>N;479T>N
11 human 7551 ZNF3 zinc finger protein 3 XM_024446919.1 98.7% 98.4% 142_156del;442T>N;479T>N
12 human 7551 ZNF3 zinc finger protein 3 XM_024446920.1 98.7% 98.4% 142_156del;442T>N;479T>N
13 human 7551 ZNF3 zinc finger protein 3 XM_024446921.1 98.7% 98.4% 142_156del;442T>N;479T>N
14 human 7551 ZNF3 zinc finger protein 3 NM_001318136.2 92.1% 88.3% (many diffs)
15 human 7551 ZNF3 zinc finger protein 3 NM_001362775.2 92.1% 88.3% (many diffs)
16 human 7551 ZNF3 zinc finger protein 3 NM_001371217.1 92.1% 88.3% (many diffs)
17 human 7551 ZNF3 zinc finger protein 3 XM_024446924.1 92.1% 88.3% (many diffs)
18 human 7551 ZNF3 zinc finger protein 3 NM_001278291.2 91.7% 91.4% 0_1ins108;319T>N;356T>N
19 human 7551 ZNF3 zinc finger protein 3 NM_001278292.2 91.7% 91.4% 0_1ins108;319T>N;356T>N
20 human 7551 ZNF3 zinc finger protein 3 NM_001362777.2 91.7% 91.4% 0_1ins108;319T>N;356T>N
21 human 7551 ZNF3 zinc finger protein 3 NM_001371215.1 91.7% 91.4% 0_1ins108;319T>N;356T>N
22 human 7551 ZNF3 zinc finger protein 3 NM_001371216.1 91.7% 91.4% 0_1ins108;319T>N;356T>N
23 human 7551 ZNF3 zinc finger protein 3 XM_024446925.1 90.7% 90.4% (many diffs)
24 human 7551 ZNF3 zinc finger protein 3 XM_024446926.1 90.7% 90.4% (many diffs)
25 human 7551 ZNF3 zinc finger protein 3 XM_024446927.1 90.7% 90.4% (many diffs)
26 human 7551 ZNF3 zinc finger protein 3 XM_024446928.1 90.7% 90.4% (many diffs)
27 human 7551 ZNF3 zinc finger protein 3 NM_001371218.1 82.1% 81.8% 0_1ins237;190T>N;227T>N
28 human 7551 ZNF3 zinc finger protein 3 NM_001371210.1 26.1% 21.2% (many diffs)
29 human 7551 ZNF3 zinc finger protein 3 NM_017715.4 26.1% 21.2% (many diffs)
30 human 7551 ZNF3 zinc finger protein 3 NM_001318137.2 18.2% 13.1% (many diffs)
31 mouse 56314 Zfp113 zinc finger protein 113 NM_019747.4 83.8% 82.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1404
ORF length:
1338
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaCTNTTG TACAAAAAAG
61TTGGCATGGA AACTCAGGCT GATCTCGTAT CTCAGGAACC TCAGGCCCTG CTTGACAGTG
121CTCTTCCTTC AAAAGTTCCT GCCTTTTCCG ACAAGGACAG CCTGGGGGAT GAGATGTTGG
181CGGCTGCGCT CCTAAAGGCC AAGTCCCAGG AGCTGGTAAC CTTTGAGGAT GTAGCTGTGT
241ACTTCATCCG GAAGGAGTGG AAGCGTTTGG AACCTGCTCA GAGGGACCTC TATAGAGATG
301TGATGCTGGA GAATTACGGG AATGTGTTCT CACTGGATCG TGAGACCAGG ACTGAAAATG
361ATCAAGAAAT TTCTGAAGAC ACAAGATCAC ATGGGGTCCT ACTGGGAAGA TTTCAAAAGG
421ATATTTCTCA GGGTCTCAAG TTTAAAGAAG CCTATGAACG AGAAGTCAGT CTGAAAAGGC
481CGCTGGGGAA CNCCCCTGGA GAAAGACTGA ACAGGAAAAT GCCAGATTNT GGTCAAGTGA
541CAGTTGAGGA GAAGCTAACC CCCAGGGGAG AGAGAAGCGA GAAATATAAT GATTTTGGGA
601ACAGCTTCAC TGTGAATTCC AACCTTATCT CACATCAGAG ACTCCCCGTG GGAGACAGAC
661CCCATAAGTG TGATGAATGT AGCAAGAGCT TTAATCGAAC TTCAGACCTT ATTCAACATC
721AGAGAATCCA CACTGGGGAA AAGCCCTATG AATGTAATGA GTGTGGGAAG GCCTTCAGCC
781AGAGCTCACA CCTTATTCAG CATCAGAGAA TCCACACTGG GGAAAAACCT TATGAATGTA
841GTGATTGTGG GAAAACCTTC AGCTGTAGCT CTGCCCTCAT TCTGCATCGG AGGATCCACA
901CGGGGGAGAA ACCCTATGAA TGTAATGAGT GTGGGAAGAC CTTCAGCTGG AGCTCCACCC
961TCACCCACCA TCAGAGAATC CACACTGGTG AGAAACCCTA CGCCTGCAAT GAATGTGGGA
1021AGGCCTTCAG CAGGAGCTCA ACCCTTATTC ACCATCAGAG AATCCACACT GGAGAAAAAC
1081CCTATGAATG TAATGAATGT GGGAAAGCCT TCAGCCAGAG CTCACACCTC TATCAGCACC
1141AGAGAATCCA CACTGGAGAG AAGCCCTACG AATGTATGGA ATGTGGAGGA AAGTTTACCT
1201ACAGTTCAGG CCTTATTCAG CATCAAAGAA TCCACACCGG GGAGAACCCC TATGAATGTA
1261GTGAGTGTGG GAAAGCCTTC AGGTACAGCT CGGCTCTTGT TCGCCATCAG AGAATTCACA
1321CTGGAGAGAA GCCTTTGAAT GGGATCGGCA TGAGCAAAAG CTCCCTCAGA GTTACGACCG
1381AGTTAAATAT CAGAGAGTCC ACGTGCCCAA CTTTCTTGTA CAAAGTtggc attataagaa
1441agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)