Construct: ORF ccsbBroadEn_07393

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004935.1_s300c1, BRDN0000394821
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GLP2R (9340)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9340 GLP2R glucagon like peptide 2 rec... NM_004246.3 99.8% 99.8% 1408G>A;1512T>C
2 human 9340 GLP2R glucagon like peptide 2 rec... XM_017025339.1 98.8% 98.7% 381_398del;1426G>A;1530T>C
3 human 9340 GLP2R glucagon like peptide 2 rec... XM_011524077.3 95.5% 95.5% 380_454del;1483G>A;1587T>C
4 human 9340 GLP2R glucagon like peptide 2 rec... XM_017025340.1 87.2% 82.2% (many diffs)
5 human 9340 GLP2R glucagon like peptide 2 rec... XM_017025341.1 80.8% 80.8% 189_190ins315;1093G>A;1197T>C
6 human 9340 GLP2R glucagon like peptide 2 rec... XM_005256861.3 72.2% 69.5% (many diffs)
7 mouse 93896 Glp2r glucagon-like peptide 2 rec... NM_175681.3 77.6% 74.8% (many diffs)
8 mouse 93896 Glp2r glucagon-like peptide 2 rec... XM_006534561.3 76.2% 73.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1728
ORF length:
1659
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAGCTGGGA TCGAGCAGGG CAGGGCCTGG GAGAGGAAGC GCGGGACTCC
121TGCCTGGCGT CCACGAGCTG CCCATGGGCA TCCCTGCCCC CTGGGGGACC AGTCCTCTCT
181CCTTCCACAG GAAGTGCTCT CTCTGGGCCC CTGGGAGGCC CTTCCTCACT CTGGTCCTGC
241TGGTTTCCAT CAAGCAAGTT ACAGGATCCC TCCTTGAGGA AACGACTCGG AAGTGGGCTC
301AGTACAAACA GGCATGTCTG AGAGACTTAC TCAAGGAACC TTCTGGCATA TTTTGTAACG
361GGACATTTGA TCAGTACGTG TGTTGGCCTC ATTCTTCTCC TGGAAATGTC TCTGTACCCT
421GCCCTTCATA CTTACCTTGG TGGAGTGAAG AGAGCTCAGG AAGGGCCTAC AGACACTGCT
481TGGCTCAGGG GACTTGGCAG ACGATAGAGA ACGCCACGGA TATTTGGCAG GATGACTCCG
541AATGCTCCGA GAACCACAGC TTCAAGCAAA ACGTGGATCG TTATGCCTTG CTGTCAACCT
601TGCAGCTGAT GTACACCGTG GGATACTCCT TCTCTCTTAT CTCCCTCTTC CTGGCTCTCA
661CCCTCCTCTT GTTTCTTCGA AAACTCCACT GCACGCGCAA CTACATCCAC ATGAACTTGT
721TTGCTTCTTT CATCCTGAGA ACCCTGGCTG TACTGGTGAA GGACGTCGTC TTCTACAACT
781CTTACTCCAA GAGGCCTGAC AATGAGAATG GGTGGATGTC CTACCTGTCA GAGATGTCCA
841CCTCCTGCCG CTCAGTCCAG GTTCTCTTGC ATTACTTTGT GGGTGCCAAT TACTTATGGC
901TGCTGGTTGA AGGCCTCTAC CTCCACACGC TGCTGGAGCC CACAGTGCTT CCTGAGAGGC
961GGCTGTGGCC CAGATACCTG CTGTTGGGTT GGGCCTTCCC TGTGCTATTT GTTGTACCCT
1021GGGGTTTCGC CCGTGCACAC CTGGAGAACA CAGGGTGCTG GACAACAAAT GGGAATAAGA
1081AAATCTGGTG GATCATCCGA GGACCCATGA TGCTCTGTGT AACAGTCAAT TTCTTCATCT
1141TCCTGAAAAT TCTCAAGCTT CTCATTTCTA AGCTCAAAGC TCATCAAATG TGCTTCAGAG
1201ATTATAAATA CAGATTGGCA AAATCAACAC TGGTCCTCAT TCCTTTATTG GGCGTTCATG
1261AGATCCTCTT CTCTTTCATC ACTGATGATC AAGTTGAAGG ATTTGCAAAA CTTATACGAC
1321TTTTCATTCA GTTGACACTG AGCTCCTTTC ATGGGTTCCT GGTGGCCTTG CAGTATGGTT
1381TTGCCAATGG AGAGGTGAAG GCTGAGCTGC GGAAATACTG GGTCCGCTTC TTGCTAGCCC
1441GCCACTCAGG CTGCAGAGCC TGTGTCCTGG GGAAGAACTT CCGGTTCCTA GGAAAATGTC
1501CCAAGAAGCT CTCGGAAGGA GATGGCGCTG AGAAGCTTCG GAAGCTGCAG CCCTCACTTA
1561ACAGTGGGCG GCTCCTACAC CTAGCCATGC GAGGTCTTGG GGAGCTGGGC GCCCAGCCCC
1621AACAGGACCA TGCACGCTGG CCCCGGGGCA GCAGCCTGTC CGAGTGCAGT GAGGGGGATG
1681TCACCATGGC CAACACCATG GAGGAGATTC TGGAAGAGAG TGAGATCTTG CCAACTTTCT
1741TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)