Construct: ORF ccsbBroadEn_07849

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000510.1_s300c1, BRDN0000457429
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KANK1 (23189)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23189 KANK1 KN motif and ankyrin repeat... NM_001256876.2 99.9% 99.8% (many diffs)
2 human 23189 KANK1 KN motif and ankyrin repeat... NM_001256877.2 99.9% 99.8% (many diffs)
3 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354334.1 99.9% 99.8% (many diffs)
4 human 23189 KANK1 KN motif and ankyrin repeat... NM_015158.4 99.9% 99.8% (many diffs)
5 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447460.1 99.8% 99.8% (many diffs)
6 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447461.1 99.8% 99.8% (many diffs)
7 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447462.1 99.8% 99.8% (many diffs)
8 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447463.1 99.8% 99.8% (many diffs)
9 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447464.1 99.8% 99.8% (many diffs)
10 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447465.1 99.8% 99.8% (many diffs)
11 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447466.1 99.8% 99.8% (many diffs)
12 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447467.1 99.8% 99.8% (many diffs)
13 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447468.1 99.8% 99.8% (many diffs)
14 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354332.1 98.5% 98.5% (many diffs)
15 human 23189 KANK1 KN motif and ankyrin repeat... XM_017014517.2 98.5% 98.5% (many diffs)
16 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354331.1 93.9% 93.9% (many diffs)
17 human 23189 KANK1 KN motif and ankyrin repeat... XM_017014522.2 93.9% 93.9% (many diffs)
18 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447469.1 93.9% 93.9% (many diffs)
19 human 23189 KANK1 KN motif and ankyrin repeat... XM_017014525.2 92.6% 92.6% (many diffs)
20 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354333.1 88.2% 88.1% (many diffs)
21 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354335.1 88.2% 88.1% (many diffs)
22 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354337.1 88.2% 88.1% (many diffs)
23 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354341.1 88.2% 88.1% (many diffs)
24 human 23189 KANK1 KN motif and ankyrin repeat... NM_153186.5 88.2% 88.1% (many diffs)
25 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447470.1 88.1% 88.1% (many diffs)
26 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354338.1 86.8% 86.8% (many diffs)
27 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354340.1 86.8% 86.8% (many diffs)
28 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354344.1 86.8% 86.8% (many diffs)
29 human 23189 KANK1 KN motif and ankyrin repeat... XM_024447471.1 86.8% 86.8% (many diffs)
30 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354339.1 82.2% 82.2% (many diffs)
31 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354342.1 82.2% 82.2% (many diffs)
32 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354343.1 82.2% 82.2% (many diffs)
33 human 23189 KANK1 KN motif and ankyrin repeat... NM_001354336.1 80.9% 80.9% (many diffs)
34 human 23189 KANK1 KN motif and ankyrin repeat... NR_148869.1 69.9% (many diffs)
35 human 23189 KANK1 KN motif and ankyrin repeat... XR_002956771.1 67.9% (many diffs)
36 mouse 107351 Kank1 KN motif and ankyrin repeat... NM_181404.6 84% 84.3% (many diffs)
37 mouse 107351 Kank1 KN motif and ankyrin repeat... XM_006526585.3 84% 84.3% (many diffs)
38 mouse 107351 Kank1 KN motif and ankyrin repeat... XM_011247113.2 84% 84.3% (many diffs)
39 mouse 107351 Kank1 KN motif and ankyrin repeat... XM_006526584.3 82.3% 82.2% (many diffs)
40 mouse 107351 Kank1 KN motif and ankyrin repeat... XM_006526587.3 74.4% 75.2% (many diffs)
41 mouse 107351 Kank1 KN motif and ankyrin repeat... XM_006526588.3 74.4% 75.2% (many diffs)
42 mouse 107351 Kank1 KN motif and ankyrin repeat... XM_006526589.3 74.4% 75.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
4122
ORF length:
4056
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TCACACCACA AAGGTTAACG GCAGTGCCTC AGGAAAAGCA GGTGATATTC
121TCAGTGGAGA CCAGGACAAG GAACAGAAAG ACCCTTACTT TGTGGAGACC CCCTATGGTT
181ATCAACTAGA CTTAGATTTC CTCAAATATG TGGATGACAT ACAGAAGGGA AATACCATCA
241AAAGACTGAA CATCCAGAAG AGGCGGAAGC CGTCCGTGCC ATGCCCAGAA CCCAGGACCA
301CATCTGGTCA GCAAGGTATA TGGACTTCCA CTGAATCCCT CTCATCCTCC AACAGTGATG
361ACAACAAGCA GTGCCCCAAC TTCCTCATAG CCAGAAGTCA AGTTACATCA ACTCCAATCT
421CAAAGCCACC TCCCCCTCTG GAGACCTCAC TCCCTTTTCT TACCATCCCA GAAAATCGAC
481AGCTGCCACC TCCCTCACCA CAACTCCCAA AGCATAACCT TCATGTCACC AAGACACTGA
541TGGAGACCCG GAGAAGACTG GAACAGGAGA GAGCCACCAT GCAGATGACA CCGGGTGAGT
601TCAGAAGGCC CAGGCTGGCC AGTTTTGGAG GCATGGGCAC CACAAGCTCC CTCCCTTCTT
661TTGTGGGTTC TGGAAACCAC AAGCCTGCCA AGCACCAGCT TCAGAATGGA TACCAAGGTA
721ATGGGGATTA TGGTAGCTAT GCCCCAGCTG CTCCCACCAC TTCCTCCATG GGGAGCTCCA
781TCCGCCACAG CCCCCTGAGC TCAGGGATCT CCACCCCAGT GACCAACGTG AGCCCCATGC
841ACCTGCAGCA CATCCGCGAG CAGATGGCCA TTGCTCTGAA ACGCCTGAAG GAGCTGGAGG
901AGCAGGTGCG AACCATCCCT GTGCTCCAGG TAAAGATCTC TGTCTTGCAA GAAGAGAAAA
961GGCAGTTGGT CTCACAGCTG AAAAACCAAA GGGCTGCATC CCAGATCAAT GTCTGTGGTG
1021TGAGGAAGCG GTCCTATAGT GCGGGGAACG CCTCCCAGCT GGAACAGCTC TCCCGGGCCC
1081GAAGAAGTGG CGGGGAATTA TACATTGACT ATGAGGAGGA AGAAATGGAG ACCGTAGAAC
1141AGAGCACGCA GAGGATAAAG GAGTTCCGGC AACTTACAGC AGACATGCAA GCCCTGGAGC
1201AGAAGATCCA GGACAGCAGC TGTGAGGCCT CCTCAGAGCT CAGGGAGAAT GGAGAGTGCC
1261GGTCTGTGGC TGTGGGTGCC GAGGAGAACA TGAACGACAT CGTCGTGTAC CACAGAGGCT
1321CCAGGTCCTG TAAGGATGCA GCTGTAGGGA CACTTGTTCA GATGAGAAAT TGTGGGGTCA
1381GCGTGACAGA GGCCATGCTT GGAGTGATGA CTGAAGCTGA CAAAGAAATT GAGCTGCAAC
1441AGCAGACCAT AGAATCCTTG AAGGAAAAGA TCTATCGCCT AGAAGTACAG CTTAGAGAAA
1501CCACCCATGA CCGGGAGATG ACTAAACTGA AACAAGAGCT GCAGGCTGCT GGATCGAGGA
1561AAAAGGTTGA CAAAGCCACG ATGGCCCAGC CGCTTGTTTT CAGTAAGGTG GTGGAGGCAG
1621TGGTGCAGAC CAGAGACCAA ATGGTCGGCA GTCACATGGA CCTGGTGGAC ACGTGTGTTG
1681GGACCTCCGT GGAAACAAAC AGTGTAGGCA TCTCCTGCCA GCCTGAATGT AAGAATAAAG
1741TCGTAGGGCC TGAGCTGCCT ATGAATTGGT GGATTGTTAA GGAGAGGGTG GAAATGCATG
1801ACCGATGTGC TGGGAGGTCT GTGGAAATGT GTGACAAGAG TGTGAGTGTG GAAGTCAGCG
1861TCTGCGAAAC AGGCAGCAAC ACAGAGGAGT CTGTGAATGA CCTCACACTC CTCAAGACAA
1921ACTTGAATCT CAAAGAAGTG CGGTCTATCG GTTGTGGAGA TTGTTCTGTT GACGTGACCG
1981TCTGCTCTCC AAAGGAGTGC GCCTCCCGGG GCGTGAACAC TGAGGCTGTT AGCCAGGTGG
2041AAGCTGCCGT CATGGCAGTG CCTCGTACTG CAGACCAGGA CACTAGCACA GATTTGGAAC
2101AGGTGCACCA GTTCACCAAC ACCGAGACGG CCACCCTCAT AGAGTCCTGC ACCAACACTT
2161GTCTAAGCAC TTTGGACAAG CAGACCAGCA CCCAGACTGT GGAGACGCGG ACAGTAGCTG
2221TAGGAGAAGG CCGTGTCAAG GACATCAACT CCTCCACCAA GACGCGGTCC ATTGGTGTTG
2281GAACGTTGCT TTCTGGCCAT TCTGGGTTTG ACAGGCCATC AGCTGTGAAG ACCAAAGAGT
2341CAGGTGTGGG GCAGATAAAT ATTAACGACA ACTATCTGGT TGGTCTCAAA ATGAGGACTA
2401TAGCTTGTGG GCCACCACAG TTGACTGTGG GGCTGACAGC CAGCAGAAGG AGCGTGGGGG
2461TTGGGGATGA CCCTGTAGGG GAATCTCTGG AGAACCCCCA GCCTCAAGCT CCACTTGGAA
2521TGATGACTGG CCTGGATCAC TACATTGAGC GTATCCAGAA GCTGCTGGCA GAACAGCAGA
2581CACTGCTGGC TGAGAACTAC AGTGAACTGG CAGAAGCTTT CGGGGAACCT CACTCACAGA
2641TGGGCTCCCT CAACTCTCAG CTCATCAGCA CCCTGTCGTC TATCAACTCT GTCATGAAAT
2701CTGCAAGCAC TGAAGAGCTG AGGAACCCTG ACTTCCAGAA AACCAGTCTG GGTAAAATCA
2761CAGGCAATTA TTTGGGATAT ACCTGTAAGT GTGGGGGCCT TCAGTCAGGA AGTCCCTTAA
2821GCTCCCAGAC ATCCCAGCCT GAGCAAGAAG TGGGGACCTC AGAAGGAAAG CCAATCAGCA
2881GCCTGGATGC CTTCCCCACT CAGGAAGGTA CGCTGTCTCC AGTGAACCTG ACAGACGACC
2941AGATCGCCGC TGGCCTCTAT GCATGTACAA ACAATGAAAG TACACTGAAG TCCATCATGA
3001AGAAGAAAGA TGGTAACAAA GATTCAAATG GCGCAAAAAA GAATCTTCAG TTTGTTGGCA
3061TTAATGGAGG GTATGAAACA ACTTCAAGTG ATGATTCCAG CTCAGATGAA AGCTCTTCTT
3121CCGAGTCAGA TGACGAGTGT GATGTCATTG AGTATCCTCT TGAAGAAGAG GAGGAGGAGG
3181AGGATGAAGA CACTCGGGGA ATGGCAGAAG GGCACCATGC AGTTAATATT GAAGGTTTGA
3241AGTCTGCCAG GGTGGAAGAT GAAATGCAGG TTCAAGAATG TGAACCTGAG AAGGTGGAAA
3301TCAGAGAGAG GTATGAATTA AGTGAAAAGA TGTTGTCTGC ATGCAACTTA CTGAAAAATA
3361CTATAAATGA CCCCAAAGCT TTGACCAGCA AAGATATGAG GTTCTGTCTG AACACCCTCC
3421AGCACGAGTG GTTCCGCGTG TCCAGTCAGA AGTCAGCCAT TCCAGCCATG GTGGGGGACT
3481ACATAGCTGC TTTTGAGGCC ATTTCCCCAG ATGTCCTCCG CTATGTCATC AACTTGGCAG
3541ACGGCAACGG CAACACAGCC CTCCATTACA GCGTGTCCCA CTCCAACTTC GAGATTGTGA
3601AGCTGCTGTT AGATGCCGAT GTGTGTAATG TGGATCACCA GAACAAGGCA GGCTACACCC
3661CCATCATGTT GGCGGCCCTC GCCGCTGTGG AAGCAGAGAA GGACATGCGG ATTGTGGAAG
3721AACTCTTTGG CTGTGGGGAT GTGAATGCCA AAGCTAGTCA GGCGGGACAG ACGGCCCTCA
3781TGCTGGCGGT CAGTCACGGA CGGATAGACA TGGTGAAGGG CCTTCTGGCC TGTGGGGCTG
3841ATGTCAACAT CCAGGATGAC GAGGGCTCCA CGGCCCTCAT GTGTGCCAGC GAGCACGGGC
3901ACGTGGAGAT TGTCAAGCTG CTGCTGGCCC AGCCCGGCTG CAACGGTCAC CTAGAGGACA
3961ACGATGGCAG CACTGCGCTC TCAATCGCCC TGGAAGCAGG ACACAAGGAC ATCGCTGTTC
4021TTCTGTATGC CCATGTCAAC TTTGCAAAAG CCCAGTCTCC GGGCACCCCT AGGCTTGGAA
4081GGAAGACGTC TCCTGGCCCC ACCCACCGAG GTTCATTTGA TTGCCCAACT TTCTTGTACA
4141AAGTTGGcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)