Construct: ORF ccsbBroadEn_07893
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF004293.1_s300c1, BRDN0000457247
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- MORC3 (23515)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | NM_015358.3 | 99.8% | 99.8% | 1724A>G;1863G>A;2172C>A |
| 2 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | NM_001320445.1 | 92.3% | 92.3% | (many diffs) |
| 3 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | NM_001320446.1 | 92.3% | 92.3% | (many diffs) |
| 4 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | XM_011529518.2 | 92.3% | 92.3% | (many diffs) |
| 5 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | XM_017028311.1 | 92.3% | 92.3% | (many diffs) |
| 6 | human | 23515 | MORC3 | MORC family CW-type zinc fi... | XM_017028312.1 | 58.9% | 58.9% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 68
- ORF end:
- 2885
- ORF length:
- 2817
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAGT 61 TGGCACCATG GCGGCGCAGC CACCCCGCGG GATACGCCTC AGCGCGCTTT GCCCGAAGTT 121 TTTACATACA AATTCTACTA GTCACACCTG GCCATTCAGT GCAGTTGCTG AATTAATAGA 181 TAATGCTTAT GATCCTGATG TGAACGCTAA ACAAATATGG ATTGACAAAA CAGTGATAAA 241 TGACCATATA TGCTTGACAT TCACCGACAA TGGGAATGGT ATGACTTCTG ATAAATTACA 301 TAAAATGCTA AGCTTTGGCT TCAGTGACAA AGTCACCATG AATGGTCATG TCCCAGTTGG 361 ATTATATGGG AATGGCTTCA AGTCGGGTTC TATGCGTCTG GGTAAAGACG CAATCGTTTT 421 TACCAAAAAT GGAGAAAGCA TGAGCGTGGG CCTTTTGTCT CAGACCTACT TGGAAGTCAT 481 AAAAGCGGAG CATGTTGTTG TTCCAATAGT GGCATTCAAC AAGCACCGAC AGATGATTAA 541 TTTAGCAGAA TCAAAAGCCA GCCTTGCTGC AATTCTGGAA CATTCTCTGT TTTCCACGGA 601 ACAGAAGTTA CTGGCAGAAC TTGATGCTAT TATAGGCAAG AAGGGGACGA GGATCATCAT 661 TTGGAATCTT AGAAGCTACA AAAATGCAAC AGAGTTCGAT TTTGAAAAGG ATAAATATGA 721 TATCAGAATT CCCGAGGATT TAGATGAGAT AACAGGGAAG AAGGGGTACA AGAAGCAGGA 781 AAGGATGGAC CAGATTGCCC CTGAGAGTGA CTATTCCCTG AGGGCTTATT GCAGTATATT 841 ATATCTAAAG CCAAGAATGC AGATCATCCT ACGTGGACAG AAAGTGAAGA CACAGCTGGT 901 TTCGAAGAGT CTTGCCTACA TCGAACGTGA TGTTTATCGA CCAAAATTTT TATCTAAAAC 961 AGTGAGAATT ACCTTTGGAT TCAACTGCAG AAATAAAGAT CATTATGGGA TAATGATGTA 1021 TCACAGAAAT AGACTCATCA AAGCTTATGA AAAAGTTGGA TGTCAGTTAA GGGCAAACAA 1081 CATGGGTGTT GGAGTGGTTG GAATTATAGA GTGTAATTTC CTTAAGCCAA CTCATAATAA 1141 ACAAGATTTC GACTATACTA ATGAGTACAG ACTTACAATA ACAGCACTAG GAGAAAAGCT 1201 GAATGATTAC TGGAATGAAA TGAAAGTGAA GAAAAATACA GAATATCCTC TAAATTTGCC 1261 AGTTGAAGAT ATACAGAAGC GTCCTGATCA GACATGGGTT CAGTGTGATG CCTGTCTAAA 1321 GTGGCGGAAA TTACCTGATG GGATGGATCA ACTTCCTGAA AAATGGTATT GCTCCAATAA 1381 CCCTGACCCA CAGTTCAGAA ATTGTGAGGT TCCAGAAGAA CCTGAAGATG AGGATTTGGT 1441 ACATCCCACT TATGAAAAAA CCTACAAAAA GACCAACAAG GAAAAATTCA GGATCAGACA 1501 ACCGGAAATG ATCCCTCGGA TTAATGCTGA ACTGTTGTTT CGGCCAACTG CTCTTTCAAC 1561 TCCAAGCTTT TCTTCTCCTA AGGAAAGTGT TCCAAGAAGA CATCTTTCAG AAGGAACAAA 1621 TTCTTATGCG ACAAGACTTC TAAATAATCA TCAAGTTCCA CCTCAGTCTG AACCTGAGAG 1681 CAACAGCTTG AAACGGAGAC TTTCTACTCG TTCCTCAATT TTGAATGCAA AGAATCGGAG 1741 ATTGAGTAGT CAGTTTGAAA ATTCAGTTTA TAAAGGTGAT GATGATGATG GAGATGTCAT 1801 CATCTTAGAA GAAAACAGTA CCCCCAAACC TGCAGTAGAT CATGATATTG ACATGAAATC 1861 AGAACAGAGT CACGTTGAGC AAGGTGGTGT TCAGGTTGAG TTTGTGGGTG ACAGTGAACC 1921 TTGTGGCCAA ACTGGTTCAA CAAGCACCTC ATCATCCCGA TGCGACCAGG GAAATACTGC 1981 AGCTACCCAG ACTGAAGTAC CAAGTTTAGT TGTTAAAAAA GAAGAAACTG TTGAAGACGA 2041 GATAGACGTA AGAAATGATG CAGTGATTCT GCCCTCCTGT GTAGAAGCTG AAGCAAAGAT 2101 ACATGAAACC CAGGAAACCA CCGATAAATC TGCAGATGAT GCAGGCTGCC AATTACAAGA 2161 ACTGAGAAAC CAGCTACTCC TTGTCACTGA GGAAAAAGAG AATTATAAAA GACAGTGTCA 2221 TATGTTTACT GATCAAATAA AAGTGTTACA ACAGAGGATA CTAGAAATGA ATGACAAGTA 2281 TGTTAAGAAA GAAACTTGCC ATCAGTCCAC TGAAACCGAT GCTGTATTTT TACTTGAAAG 2341 TATTAATGGC AAATCTGAAA GTCCAGACCA TATGGTATCT CAGTATCAGC AAGCTTTGGA 2401 AGAAATAGAA AGGCTGAAAA AACAATGTAG TGCTTTGCAA CATGTAAAGG CTGAATGCAG 2461 CCAGTGTTCC AATAATGAGA GTAAAAGTGA AATGGATGAG ATGGCTGTGC AGCTTGACGA 2521 TGTGTTTAGA CAACTGGACA AATGCAGTAT TGAGAGGGAC CAGTATAAAA GTGAGGTTGA 2581 ATTGCTGGAA ATGGAAAAGT CACAAATCCG TTCACAGTGT GAAGAACTCA AAACTGAAGT 2641 AGAACAGTTA AAATCTACAA ATCAACAGAC GGCAACAGAT GTTTCAACAT CAAGTAACAT 2701 TGAGGAGTCT GTAAATCATA TGGATGGAGA AAGCCTCAAA CTCCGATCTC TTCGAGTTAA 2761 CGTAGGACAA CTGCTGGCTA TGATTGTGCC TGATCTTGAT CTTCAGCAAG TGAATTACGA 2821 TGTTGATGTA GTTGATGAGA TTTTAGGACA AGTTGTTGAA CAAATGAGTG AAATCAGTAG 2881 TACTTTGCCA ACTTTCTTGT ACAAAGTTGG cattataaga aagcattgct tatcaatttg 2941 ttgcaacgaa c