Construct: ORF ccsbBroadEn_07950

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005566.1_s300c1, BRDN0000455606
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RAB26 (25837)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25837 RAB26 RAB26, member RAS oncogene ... NM_014353.5 99.8% 99.6% 680A>G
2 human 25837 RAB26 RAB26, member RAS oncogene ... XM_011522448.1 82.6% 79.7% 590_621del;693_694ins107
3 human 25837 RAB26 RAB26, member RAS oncogene ... NM_001308053.1 74% 73.8% 0_1ins198;482A>G
4 human 25837 RAB26 RAB26, member RAS oncogene ... XM_011522450.2 54.5% 54.2% 0_1ins348;332A>G
5 mouse 328778 Rab26 RAB26, member RAS oncogene ... NM_177375.1 83.2% 85.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
834
ORF length:
768
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC CAGGAAGAAG ACCCCCAAGA GCAAAGGGGC CAGCACCCCC GCTGCCTCCA
121CGCTGCCCAC CGCCAACGGG GCCCGACCGG CGCGCTCCGG GACTGCGCTT TCCGGCCCCG
181ACGCGCCGCC CAACGGGCCC TTGCAGCCCG GCCGGCCCTC GCTTGGCGGC GGTGTCGACT
241TCTACGACGT CGCCTTCAAG GTCATGCTGG TGGGGGACTC GGGTGTGGGG AAGACCTGTC
301TGCTGGTGCG ATTCAAGGAT GGTGCTTTCC TGGCGGGGAC CTTCATCTCC ACCGTAGGCA
361TTGACTTCCG GAACAAAGTT CTGGACGTGG ATGGTGTGAA GGTGAAGCTG CAGATGTGGG
421ACACAGCTGG TCAGGAGCGG TTCCGCAGTG TTACCCATGC CTACTACCGG GATGCTCATG
481CTCTGCTGCT GCTCTACGAT GTCACCAACA AGGCCTCCTT TGACAACATC CAGGCCTGGC
541TGACCGAGAT CCACGAGTAC GCCCAGCACG ACGTGGCGCT CATGCTGCTG GGGAACAAGG
601TGGACTCTGC CCATGAGCGT GTGGTGAAGA GGGAGGACGG GGAGAAGCTG GCCAAGGAGT
661ATGGACTGCC CTTCATGGAG ACCAGCGCCA AGACGGGCCT CAACGTGGAC TTGGCCTTCA
721CAGCCATAGC AAAGGAGTTG AAGCGGCGCT CCATGAAGGC TCCCAGCGAG CCGCGCTTCC
781GGCTGCATGA TTACGTTAAG AGGGAGGGTC GAGGGGCCTC CTGCTGCCGC CCTTGCCCAA
841CTTTCTTGTA CAAAGTTGGc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)