Construct: ORF ccsbBroadEn_08372

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011768.1_s300c1, BRDN0000397900
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SIAE (54414)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54414 SIAE sialic acid acetylesterase NM_170601.5 99.8% 100% 225G>A;1515C>A
2 human 54414 SIAE sialic acid acetylesterase NM_001199922.1 93.1% 93.3% 0_1ins105;120G>A;1410C>A
3 human 54414 SIAE sialic acid acetylesterase XM_017017930.1 63.4% 63.4% 0_1ins573;942C>A
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1635
ORF length:
1569
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGT CGCGCCGGGG CTTGTACTCG GGCTGGTGCT GCCATTAATC CTGTGGGCCG
121ACAGAAGTGC AGGTATTGGT TTTCGCTTTG CTTCATACAT CAATAATGAT ATGGTGCTGC
181AGAAGGAGCC TGCTGGGGCA GTGATATGGG GCTTCGGTAC ACCTGGAGCC ACAGTGACCG
241TGACCCTGCG CCAAGGTCAG GAAACCATCA TGAAGAAAGT GACCAGTGTA AAAGCTCACT
301CTGATACGTG GATGGTGGTA CTGGATCCTA TGAAGCCTGG AGGACCTTTC GAAGTGATGG
361CACAACAGAC TTTGGAGAAA ATAAACTTCA CCCTGAGAGT TCATGACGTC CTGTTTGGAG
421ATGTCTGGCT CTGTAGTGGG CAGAGTAACA TGCAGATGAC TGTGTTACAG ATATTTAATG
481CTACAAGGGA GTTGTCTAAC ACTGCGGCAT ATCAGTCTGT CCGCATCCTC TCTGTCTCTC
541CCATTCAAGC AGAGCAGGAG CTGGAGGACC TTGTTGCGGT TGACTTGCAG TGGTCTAAGC
601CCACCTCAGA AAACTTAGGC CATGGATATT TCAAGTACAT GTCAGCAGTG TGCTGGCTCT
661TTGGACGTCA CCTTTATGAC ACTCTGCAGT ATCCCATCGG GCTGATCGCC TCCAGCTGGG
721GCGGGACACC CATTGAAGCC TGGTCATCTG GACGGTCACT GAAAGCCTGT GGGGTCCCTA
781AACAAGGGTC CATTCCATAC GATTCTGTAA CTGGTCCCAG TAAGCACTCT GTTCTCTGGA
841ATGCCATGAT CCATCCACTG TGCAATATGA CTCTGAAAGG GGTAGTATGG TACCAGGGGG
901AGTCCAATAT AAATTATAAC ACGGATCTGT ACAATTGCAC ATTCCCTGCA CTCATCGAAG
961ACTGGCGTGA AACCTTCCAC CGTGGTTCCC AGGGGCAGAC GGAGCGTTTC TTCCCATTTG
1021GACTTGTCCA GTTATCTTCA GATTTGTCTA AGAAGAGCTC AGACGATGGA TTTCCCCAGA
1081TCCGTTGGCA TCAAACAGCA GACTTCGGCT ATGTCCCCAA CCCAAAGATG CCCAATACTT
1141TCATGGCTGT AGCTATGGAT CTCTGTGATA GAGACTCGCC TTTTGGCAGC ATCCACCCTC
1201GAGATAAACA GACTGTGGCT TATCGGCTGC ATTTGGGGGC CCGTGCTCTG GCTTATGGTG
1261AGAAGAATTT GACCTTTGAA GGACCACTGC CTGAGAAGAT AGAACTCTTG GCTCACAAGG
1321GGCTGCTCAA TCTCACATAT TACCAGCAAA TCCAGGTGCA GAAAAAGGAC AACAAGATAT
1381TTGAGATCTC CTGTTGCAGT GACCATCGAT GCAAGTGGCT TCCAGCTTCT ATGAACACCG
1441TCTCCACCCA GTCCCTGACC CTGGCGATCG ATTCTTGTCA TGGCACTGTG GTTGCTCTCC
1501GCTATGCTTG GACCACGTGG CCTTGTGAAT ATAAGCAGTG TCCCCTATAC CACCCCAGTA
1561GTGCCCTGCC AGCCCCTCCA TTCATTGCTT TCATTACAGA CCAGGGTCCT GGACATCAGA
1621GCAATGTTGC TAAATGCCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
1681tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)