Construct: ORF ccsbBroadEn_08373

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014345.1_s300c1, BRDN0000387800
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DNAJC10 (54431)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54431 DNAJC10 DnaJ heat shock protein fam... NM_018981.4 99.8% 99.8% 609C>T;1938T>G;2241A>G
2 human 54431 DNAJC10 DnaJ heat shock protein fam... NM_001271581.3 94% 94% (many diffs)
3 human 54431 DNAJC10 DnaJ heat shock protein fam... NR_073365.2 11.3% (many diffs)
4 human 54431 DNAJC10 DnaJ heat shock protein fam... NR_073366.2 11.3% (many diffs)
5 human 54431 DNAJC10 DnaJ heat shock protein fam... NR_073367.2 10.8% (many diffs)
6 mouse 66861 Dnajc10 DnaJ heat shock protein fam... NM_024181.2 87.3% 90.4% (many diffs)
7 mouse 66861 Dnajc10 DnaJ heat shock protein fam... XR_001783164.1 48.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2448
ORF length:
2379
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGGAGTCTGG TTAAATAAAG ATGACTATAT CAGAGACTTG AAAAGGATCA
121TTCTCTGTTT TCTGATAGTG TATATGGCCA TTTTAGTGGG CACAGATCAG GATTTTTACA
181GTTTACTTGG AGTGTCCAAA ACTGCAAGCA GTAGAGAAAT AAGACAAGCT TTCAAGAAAT
241TGGCATTGAA GTTACATCCT GATAAAAACC CGAATAACCC AAATGCACAT GGCGATTTTT
301TAAAAATAAA TAGAGCATAT GAAGTACTCA AAGATGAAGA TCTACGGAAA AAGTATGACA
361AATATGGAGA AAAGGGACTT GAGGATAATC AAGGTGGCCA GTATGAAAGC TGGAACTATT
421ATCGTTATGA TTTTGGTATT TATGATGATG ATCCTGAAAT CATAACATTG GAAAGAAGAG
481AATTTGATGC TGCTGTTAAT TCTGGAGAAC TGTGGTTTGT AAATTTTTAC TCCCCAGGCT
541GTTCACACTG CCATGATTTA GCTCCCACAT GGAGAGACTT TGCTAAAGAA GTGGATGGGT
601TACTTCGAAT TGGAGCTGTT AACTGTGGTG ATGATAGAAT GCTTTGCCGA ATGAAAGGAG
661TCAACAGCTA TCCCAGTCTC TTCATTTTTC GGTCTGGAAT GGCCCCAGTG AAATATCATG
721GAGACAGATC AAAGGAGAGT TTAGTGAGTT TTGCAATGCA GCATGTTAGA AGTACAGTGA
781CAGAACTTTG GACAGGAAAT TTTGTCAACT CCATACAAAC TGCTTTTGCT GCTGGTATTG
841GCTGGCTGAT CACTTTTTGT TCAAAAGGAG GAGATTGTTT GACTTCACAG ACACGACTCA
901GGCTTAGTGG CATGTTGGAT GGTCTTGTTA ATGTAGGATG GATGGACTGT GCCACCCAGG
961ATAACCTTTG TAAAAGCTTA GATATTACAA CAAGTACTAC TGCTTATTTT CCTCCTGGAG
1021CCACTTTAAA TAACAAAGAG AAAAACAGTA TTTTGTTTCT CAACTCATTG GATGCTAAAG
1081AAATATATTT GGAAGTAATA CATAATCTTC CAGATTTTGA ACTACTTTCG GCAAACACAC
1141TAGAGGATCG TTTGGCTCAT CATCGGTGGC TGTTATTTTT TCATTTTGGA AAAAATGAAA
1201ATTCAAATGA TCCTGAGCTG AAAAAACTAA AAACTCTACT TAAAAATGAT CATATTCAAG
1261TTGGCAGGTT TGACTGTTCC TCTGCACCAG ACATCTGTAG TAATCTGTAT GTTTTTCAGC
1321CGTCTCTAGC AGTATTTAAA GGACAAGGAA CCAAAGAATA TGAAATTCAT CATGGAAAGA
1381AGATTCTATA TGATATACTT GCCTTTGCCA AAGAAAGTGT GAATTCTCAT GTTACCACGC
1441TTGGACCTCA AAATTTTCCT GCCAATGACA AAGAACCATG GCTTGTTGAT TTCTTTGCCC
1501CCTGGTGTCC ACCATGTCGA GCTTTACTAC CAGAGTTACG AAGAGCATCA AATCTTCTTT
1561ATGGTCAGCT TAAGTTTGGT ACACTAGATT GTACAGTTCA TGAGGGACTC TGTAACATGT
1621ATAACATTCA GGCTTATCCA ACAACAGTGG TATTCAACCA GTCCAACATT CATGAGTATG
1681AAGGACATCA CTCTGCTGAA CAAATCTTGG AGTTCATAGA GGATCTTATG AATCCTTCAG
1741TGGTCTCCCT TACACCCACC ACCTTCAACG AACTAGTTAC ACAAAGAAAA CACAACGAAG
1801TCTGGATGGT TGATTTCTAT TCTCCGTGGT GTCATCCTTG CCAAGTCTTA ATGCCAGAAT
1861GGAAAAGAAT GGCCCGGACA TTAACTGGAC TGATCAACGT GGGCAGTATA GATTGCCAAC
1921AGTATCATTC TTTTTGTGCC CAGGAAAACG TTCAAAGATA CCCTGAGATA AGATTTTTTC
1981CCCCAAAATC AAATAAAGCT TATCAGTATC ACAGTTACAA TGGTTGGAAT AGGGATGCTT
2041ATTCCCTGAG AATCTGGGGT CTAGGATTTT TACCTCAAGT ATCCACAGAT CTAACACCTC
2101AGACTTTCAG TGAAAAAGTT CTACAAGGGA AAAATCATTG GGTGATTGAT TTCTATGCTC
2161CTTGGTGTGG ACCTTGCCAG AATTTTGCTC CAGAATTTGA GCTCTTGGCT AGGATGATTA
2221AAGGAAAAGT GAAAGCTGGA AAAGTAGACT GTCAGGCTTA TGCTCAGACA TGCCAGAAAG
2281CTGGGATCAG GGCCTATCCA ACTGTTAAGT TTTATTTCTA CGAAAGAGCA AAGAGAAATT
2341TTCAAGAAGA GCAGATAAAT ACCAGAGATG CAAAAGCAAT CGCTGCCTTA ATAAGTGAAA
2401AATTGGAAAC TCTCCGAAAT CAAGGCAAGA GGAATAAGGA TGAACTTTTG CCAACTTTCT
2461TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)