Construct: ORF ccsbBroadEn_08446

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012133.1_s300c1, BRDN0000392596
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MTARC2 (54996)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54996 MTARC2 mitochondrial amidoxime red... NM_001317338.2 99.7% 99.7% 72G>C;132G>T;528G>A
2 human 54996 MTARC2 mitochondrial amidoxime red... NM_017898.5 99.7% 99.7% 72G>C;132G>T;528G>A
3 human 54996 MTARC2 mitochondrial amidoxime red... NM_001331042.2 74.6% 73.3% (many diffs)
4 human 54996 MTARC2 mitochondrial amidoxime red... XM_011509684.1 72.9% 72.8% 0_1ins270;2T>G;258G>A
5 human 54996 MTARC2 mitochondrial amidoxime red... XR_247029.5 31% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1071
ORF length:
1005
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG CGCTTCCAGC TCCTCCGCGC TGGCCCGCCT CGGCCTCCCA GCCCGGCCCT
121GGCCCAGGTG GCTCGGCGTC GCCGCGCTAG GACTGGCCGC CGTGGCCCTG GGGACTGTCG
181CCTGGCGCCG CGCATGTCCC AGGCGGCGCC GGCGGCTGCA GCAGGTGGGC ACCGTGGCGA
241AGCTCTGGAT CTACCCGGTG AAATCCTGCA AAGGGGTGCC GGTGAGCGAG GCTGAGTGCA
301CGGCCATGGG GCTGCGCAGC GGCAACCTGC GGGACAGGTT TTGGCTGGTG ATTAAGGAAG
361ATGGACACAT GGTCACTGCC CGACAGGAGC CTCGCCTCGT GCTCATCTCC ATCATTTATG
421AGAATAACTG CCTGATCTTC AGGGCTCCAG ACATGGACCA GCTGGTTTTG CCTAGCAAGC
481AGCCTTCCTC AAACAAACTC CACAACTGCA GGATATTTGG CCTTGACATT AAAGGCAGAG
541ACTGTGGCAA TGAGGCAGCT AAGTGGTTCA CCAACTTCTT GAAAACTGAA GCATATAGAT
601TGGTTCAATT TGAGACAAAC ATGAAGGGAA GAACATCAAG AAAACTTCTC CCCACTCTTG
661ATCAGAATTT CCAGGTGGCC TACCCAGACT ACTGCCCGCT CCTGATCATG ACAGATGCCT
721CCCTGGTAGA TTTGAATACC AGGATGGAGA AGAAAATGAA AATGGAGAAT TTCAGGCCAA
781ATATTGTGGT GACCGGCTGT GATGCTTTTG AGGAGGATAC CTGGGATGAA CTCCTAATTG
841GTAGTGTAGA AGTGAAAAAG GTAATGGCAT GCCCCAGGTG TATTTTGACA ACGGTGGACC
901CAGACACTGG AGTCATAGAC AGGAAACAGC CACTGGACAC CCTGAAGAGC TACCGCCTGT
961GTGATCCTTC TGAGAGGGAA TTGTACAAGT TGTCTCCACT TTTTGGGATC TATTATTCAG
1021TGGAAAAAAT TGGAAGCCTG AGAGTTGGTG ACCCTGTGTA TCGGATGGTG TACCCAACTT
1081TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)