Construct: ORF ccsbBroadEn_08531
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF012743.1_s300c1, BRDN0000397997
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ZNF331 (55422)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001079906.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 2 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001079907.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 3 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001253798.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 4 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001253799.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 5 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001253800.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 6 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001253801.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 7 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317113.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 8 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317114.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 9 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317115.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 10 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317116.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 11 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317117.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 12 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317118.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 13 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317119.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 14 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317120.2 | 99.8% | 99.7% | 175G>A;330A>G |
| 15 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_001317121.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 16 | human | 55422 | ZNF331 | zinc finger protein 331 | NM_018555.6 | 99.8% | 99.7% | 175G>A;330A>G |
| 17 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_011527076.3 | 99.8% | 99.7% | 175G>A;330A>G |
| 18 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_011527078.3 | 99.8% | 99.7% | 175G>A;330A>G |
| 19 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_017026936.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 20 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_017026937.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 21 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_017026940.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 22 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451577.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 23 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451578.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 24 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451579.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 25 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451580.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 26 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451581.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 27 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451582.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 28 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451583.1 | 99.8% | 99.7% | 175G>A;330A>G |
| 29 | human | 55422 | ZNF331 | zinc finger protein 331 | XM_024451584.1 | 99.8% | 99.7% | 175G>A;330A>G |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1455
- ORF length:
- 1389
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGGC CCAGGGTTTG GTGACGTTCG CCGACGTAGC CATAGACTTT TCTCAGGAGG 121 AGTGGGCCTG TCTGAACTCT GCTCAGAGGG ACCTGTACTG GGACGTGATG CTGGAGAACT 181 ACAGTAACTT GGTCTCACTG GATTTGGAGT CAGCATATGA AAATAAGAGT TTACCTACAA 241 AAAAAAACAT TCATGAAATA AGGGCTTCCA AAAGGAATTC AGATAGAAGA AGTAAATCCC 301 TTGGCCGTAA CTGGATATGT GAAGGTACGC TTGAAAGACC ACAGCGCTCC AGAGGGAGGT 361 ATGTCAATCA GATGATCATC AATTATGTCA AAAGGCCTGC TACTAGAGAA GGCACCCCTC 421 CTAGAACACA TCAGAGACAT CATAAGGAGA ATTCCTTTGA ATGTAAGGAC TGTGGGAAGG 481 CCTTTAGTCG TGGCTATCAA CTTAGTCAAC ATCAGAAAAT CCATACTGGT GAGAAACCTT 541 ATGAATGTAA AGAATGTAAG AAGGCCTTCC GTTGGGGCAA TCAGCTTACT CAACATCAAA 601 AAATTCATAC TGGGGAGAAG CCCTACGAAT GTAAAGACTG TGGGAAGGCT TTTCGATGGG 661 GCTCAAGCCT CGTTATTCAT AAGAGGATTC ATACTGGTGA AAAACCCTAT GAATGTAAAG 721 ACTGTGGAAA GGCCTTTCGG CGTGGTGATG AGCTCACTCA GCACCAGAGA TTCCACACTG 781 GGGAGAAAGA CTACGAATGC AAAGACTGTG GGAAGACCTT TAGCCGTGTG TATAAACTTA 841 TTCAGCACAA GAGAATTCAT AGTGGGGAGA AGCCTTACGA GTGTAAAGAC TGTGGGAAGG 901 CTTTTATTTG TGGTTCAAGC CTCATTCAGC ATAAAAGAAT TCACACAGGT GAGAAACCCT 961 ATGAATGTCA AGAATGTGGG AAGGCCTTTA CTCGAGTCAA TTACCTTACT CAGCATCAGA 1021 AGATCCACAC CGGTGAGAAG CCTCACGAAT GTAAGGAGTG TGGGAAGGCC TTTCGCTGGG 1081 GTTCGAGCCT CGTTAAGCAC GAGAGGATAC ATACGGGCGA GAAGCCGTAC AAGTGCACAG 1141 AATGTGGGAA GGCCTTCAAT TGTGGCTATC ACCTCACTCA GCACGAGAGA ATCCACACAG 1201 GCGAAACCCC GTATAAATGT AAGGAGTGTG GGAAGGCTTT CATTTATGGA TCGAGCCTCG 1261 TGAAACATGA GAGAATTCAT ACCGGGGTGA AACCCTATGG GTGTACAGAA TGTGGGAAGA 1321 GCTTTAGTCA CGGCCATCAG CTTACACAAC ATCAGAAAAC GCACAGTGGG GCGAAATCCT 1381 ACGAATGTAA GGAGTGCGGG AAGGCATGTA ACCACCTAAA CCATCTCCGA GAACATCAGA 1441 GGATCCACAA CAGTTGCCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct 1501 tatcaatttg ttgcaacgaa c