Construct: ORF ccsbBroadEn_09108

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001977.1_s300c1, BRDN0000394964
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SH3BGRL2 (83699)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 83699 SH3BGRL2 SH3 domain binding glutamat... NM_031469.4 99.6% 99% 116T>C
2 human 83699 SH3BGRL2 SH3 domain binding glutamat... XM_011536165.2 88% 85% (many diffs)
3 mouse 212531 Sh3bgrl2 SH3 domain binding glutamic... NM_172507.5 88.1% 92.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
390
ORF length:
321
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGTCATCCGC GTGTTCATCG CCTCTTCCTC GGGCTTCGTG GCGATAAAGA
121AGAAGCAGCA AGATGTGGTT AGATTTCTGG AAGCCAACAA GATAGAGTTT GAGGAGGTGG
181ATACCACAAT GTCAGAAGAA CAGAGGCAAT GGATGTACAA AAACGTCCCC CCGGAAAAGA
241AACCCACTCA GGGCAACCCC CTGCCACCTC AGATATTTAA TGGCGACCGA TACTGTGGAG
301ATTATGACAG TTTTTTTGAA TCCAAGGAAA GCAACACAGT CTTTTCATTT TTAGGCCTGA
361AACCACGGTT GGCATCAAAG GCAGAACCTT TGCCAACTTT CTTGTACAAA GTtggcatta
421taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)