Construct: ORF ccsbBroadEn_09202

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006908.1_s300c1, BRDN0000391344
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC12A8 (84561)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84561 SLC12A8 solute carrier family 12 me... NM_001195483.1 99.9% 99.8% 1991G>A;1998T>C
2 human 84561 SLC12A8 solute carrier family 12 me... NM_024628.5 99.9% 99.8% 1991G>A;1998T>C
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2211
ORF length:
2142
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GACCCAGATG TCCCAGGTGC AGGAGCTCTT CCATGAGGCA GCCCAGCAGG
121ATGCCCTGGC CCAGCCCCAG CCCTGGTGGA AGACCCAGCT GTTCATGTGG GAGCCTGTGC
181TGTTTGGGAC CTGGGATGGT GTGTTCACAT CCTGCATGAT CAACATCTTT GGGGTTGTGC
241TCTTCCTGAG GACTGGCTGG CTGGTGGGAA ACACAGGAGT GCTCCTGGGC ATGTTCCTGG
301TGTCCTTCGT CATCCTGGTG GCCCTCGTCA CGGTGCTGTC TGGCATTGGC GTCGGGGAGC
361GCAGCAGCAT CGGCAGCGGT GGCGTCTACT CCATGATCTC CTCGGTCCTG GGTGGGCAGA
421CGGGAGGCAC CATCGGGCTG CTCTATGTGT TTGGACAGTG TGTTGCAGGT GCCATGTATA
481TCACCGGCTT TGCTGAATCC ATCTCGGATT TGCTGGGCCT CGGGAATATC TGGGCTGTGC
541GAGGAATTTC AGTTGCGGTG CTTCTGGCCT TGCTGGGCAT TAACCTCGCA GGTGTCAAAT
601GGATAATCCG CCTCCAGCTG CTGTTGCTGT TCCTGCTGGC CGTGTCCACA CTGGACTTTG
661TGGTGGGTTC TTTCACCCAC CTGGACCCAG AACATGGTTT CATTGGATAT TCACCCGAAC
721TGCTACAGAA CAACACGCTG CCCGATTACA GCCCGGGGGA ATCTTTTTTC ACTGTCTTTG
781GGGTTTTCTT CCCAGCGGCT ACAGGAGTCA TGGCCGGCTT CAACATGGGG GGCGACCTCA
841GGGAGCCTGC CGCCAGCATT CCCCTGGGCT CCCTGGCAGC TGTTGGCATC TCGTGGTTTC
901TGTACATCGT CTTCGTCTTC CTCCTGGGCG CCATCTGCAC TCGAGAGGCC CTTCGCTATG
961ACTTCCTGAT AGCGGAAAAG GTATCCCTCA TGGGCTTCCT GTTCCTTTTG GGCTTATACA
1021TCTCGTCCCT GGCTTCCTGC ATGGGAGGAC TTTATGGAGC TCCCCGCATC CTGCAGTGCA
1081TTGCCCAGGA GAAAGTGATC CCTGCACTTG CCTGTCTGGG ACAAGGGAAG GGGCCAAACA
1141AAACACCCGT GGCTGCCATC TGCCTGACCA GCTTGGTGAC CATGGCCTTT GTTTTTGTGG
1201GTCAAGTGAA CGTTCTGGCC CCCATCGTCA CCATCAACTT CATGCTGACA TACGTTGCAG
1261TGGACTACTC TTACTTCTCC CTGTCCATGT GTTCCTGCAG CCTGACCCCG GTGCCTGAGC
1321CGGTGCTCAG GGAGGGCGCA GAAGGCCTCC ACTGCTCTGA GCACCTGCTC TTAGAGAAAG
1381CTCCCAGTTA CGGCTCTGAG GGACCTGCCC AAAGAGTCTT GGAGGGCACG CTACTGGAAT
1441TCACCAAGGA CATGGATCAG CTCCTCCAGC TAACCAGGAA GCTTGAGAGT AGCCAGCCCA
1501GGCAAGGAGA GGGTAACAGG ACCCCAGAAA GTCAGAAGAG GAAAAGCAAG AAGGCCACCA
1561AGCAGACCCT ACAAGATAGC TTCCTCTTGG ACCTCAAATC CCCTCCTTCT TTCCCTGTCG
1621AGATCTCTGA CAGGTTGCCC GCTGCCTCCT GGGAGGGGCA GGAGTCCTGC TGGAACAAGC
1681AGACTTCCAA GAGCGAAGGG ACTCAGCCTG AGGGAACATA TGGAGAGCAA CTTGTTCCTG
1741AGCTGTGCAA CCAATCAGAG TCCAGTGGAG AAGATTTCTT CCTGAAGTCC AGGCTCCAAG
1801AACAAGATGT CTGGAGAAGA TCCACTTCTT TCTATACCCA CATGTGCAAC CCCTGGGTCT
1861CCCTGTTGGG GGCTGTTGGG TCCCTTCTCA TCATGTTTGT GATACAGTGG GTGTATACCC
1921TGGTTAACAT GGGTGTTGCT GCCATCGTGT ATTTCTACAT TGGCCGGGCC AGTCCAGGGC
1981TTCACCTTGG ATCAGCCTCC AACTTCAGCT TTTTCCGGTG GATGAGGTCT CTCTTGCTCC
2041CCTCCTGCAG GAGCTTGCAG TCCCCCCAGG AGCAGATCAT CTTGGCGCCG TCCCTGGCTA
2101AGGTTGACAT GGAGATGACT CAGCTCACCC AGGAGAATGC AGACTTCGCC ACTCGGGATC
2161GCTACCACCA CTCCTCCCTC GTGAACCGGG AGCAGCTGAT GCCTCACTAC TTGGCCAACT
2221TTCTTGTACA AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)