Construct: ORF ccsbBroadEn_09211

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003723.1_s300c1, BRDN0000388187
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
C22orf23 (84645)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84645 C22orf23 chromosome 22 open reading ... NM_032561.5 99.8% 100% 396A>G
2 human 84645 C22orf23 chromosome 22 open reading ... XM_005261781.1 90.9% 87.2% (many diffs)
3 human 84645 C22orf23 chromosome 22 open reading ... XM_005261782.3 90.9% 87.2% (many diffs)
4 human 84645 C22orf23 chromosome 22 open reading ... NM_001207062.1 90.1% 89.8% 103_104ins63;333A>G
5 human 84645 C22orf23 chromosome 22 open reading ... XM_005261784.3 90.1% 89.8% 103_104ins63;333A>G
6 human 84645 C22orf23 chromosome 22 open reading ... XM_005261783.2 81.8% 77.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
717
ORF length:
651
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TTCACAGAAG CAGATGGAGG TAGTGACCAA AGGAACTGGG TTCCGGCGCC
121GCCCCAAGAC CATCACTTAC ACCCCGGGGA CCTGCGAGCT GCTCAGAGTG ATGATGAAGG
181AATCCAAACT GACGAACATC CAGCAGCGCC ACATCATGGA CATCATGAAA AGAGGAGATG
241CTTTGCCCCT ACAGTGCAGC CCAACATCCA GCCAGAGAGT CTTACCTTCC AAGCAAATAG
301CCTCGCCCAT CTACCTGCCT CCCATCCTCG CAGCCCGTCC CCACCTCCGG CCTGCCAACA
361TGTGTCAAGC CAATGGGGCC TACAGCCGGG AGCAGTTCAA GCCTCAAGCC ACCAGGGATT
421TGGAGAAGGA GAAACAAAGA CTCCAAAATA TCTTTGCCAC GGGGAAGGAC ATGGAGGAAC
481GGAAAAGAAA GGCCCCTCCT GCACGACAGA AGGCTCCAGC CCCTGAGCTA GACCGATTTG
541AAGAGCTGGT GAAGGAAATC CAGGAGAGGA AAGAATTCCT GGCTGACATG GAGGCCCTGG
601GACAGGGCAA ACAGTACCGA GGAATCATCC TTGCTGAAAT CTCCCAGAAA CTCCGGGAAA
661TGGAAGACAT TGACCACAGA AGGAGTGAGG AACTTAGGAA GGGTCTTGCC ACCACTTACC
721CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
781aac

Download FASTA (ORF) (Full)