Construct: ORF ccsbBroadEn_09259

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010978.1_s300c1, BRDN0000397652
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RGS8 (85397)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 85397 RGS8 regulator of G protein sign... NM_033345.3 99.8% 100% 345A>C
2 human 85397 RGS8 regulator of G protein sign... XM_011510089.3 99.8% 100% 345A>C
3 human 85397 RGS8 regulator of G protein sign... XM_017002631.2 99.8% 100% 345A>C
4 human 85397 RGS8 regulator of G protein sign... XM_017002632.1 99.8% 100% 345A>C
5 human 85397 RGS8 regulator of G protein sign... XM_017002633.1 99.8% 100% 345A>C
6 human 85397 RGS8 regulator of G protein sign... XM_017002634.1 99.8% 100% 345A>C
7 human 85397 RGS8 regulator of G protein sign... XM_011510091.3 89.7% 89.8% 0_1ins60;285A>C
8 human 85397 RGS8 regulator of G protein sign... NM_001102450.2 88.9% 87.3% (many diffs)
9 human 85397 RGS8 regulator of G protein sign... NM_001369564.2 88.9% 87.3% (many diffs)
10 human 85397 RGS8 regulator of G protein sign... XM_005245555.4 88.9% 87.3% (many diffs)
11 human 85397 RGS8 regulator of G protein sign... XM_011510090.2 88.9% 87.3% (many diffs)
12 human 85397 RGS8 regulator of G protein sign... XM_017002635.1 88.9% 87.3% (many diffs)
13 human 85397 RGS8 regulator of G protein sign... XM_017002637.2 88.9% 87.3% (many diffs)
14 mouse 67792 Rgs8 regulator of G-protein sign... NM_026380.3 81.5% 85.8% (many diffs)
15 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529818.3 81.5% 85.8% (many diffs)
16 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529819.3 81.5% 85.8% (many diffs)
17 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529820.3 81.5% 85.8% (many diffs)
18 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529821.3 81.5% 85.8% (many diffs)
19 mouse 67792 Rgs8 regulator of G-protein sign... NM_001347115.1 80.8% 87.8% (many diffs)
20 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529822.3 80.8% 87.8% (many diffs)
21 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529824.3 80.8% 87.8% (many diffs)
22 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529825.3 80.8% 87.8% (many diffs)
23 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529826.3 80.8% 87.8% (many diffs)
24 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529827.3 80.8% 87.8% (many diffs)
25 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529828.3 80.8% 87.8% (many diffs)
26 mouse 67792 Rgs8 regulator of G-protein sign... XM_006529829.3 66.1% 70.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
660
ORF length:
594
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTG GAACACCTTA ACCCGAAGCC TCTCTGACCA TCCAGTTGGC AAAGACCCTC
121AGGCCATGAG GACTGGCCAA AGACAGAACA AAGGGATGAG GACTCGACTG GGATGCCTGT
181CTCACAAGTC AGACTCGTGT AGTGATTTCA CAGCTATTCT TCCAGACAAA CCCAACCGCG
241CTCTCAAGAG ATTATCGACA GAAGAAGCTA CGAGGTGGGC AGATTCCTTT GATGTGCTTC
301TCTCTCATAA GTATGGGGTG GCTGCATTCC GTGCCTTCTT GAAGACGGAG TTCAGTGAGG
361AGAACCTGGA ATTCTGGTTG GCCTGTGAGG AGTTCAAGAA GACCAGGTCC ACTGCAAAAC
421TGGTCTCTAA GGCCCATAGG ATCTTTGAGG AGTTTGTGGA TGTGCAGGCT CCACGGGAGG
481TAAACATTGA CTTCCAGACC CGAGAAGCCA CGAGGAAGAA CCTGCAGGAG CCATCCCTGA
541CTTGCTTTGA CCAAGCCCAA GGAAAAGTAC ACAGCCTCAT GGAGAAAGAC TCTTACCCCA
601GGTTCCTGAG GTCCAAAATG TACTTAGATC TGCTGTCCCA AAGCCAGAGG AGGCTCAGTT
661ACCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
721acgaac

Download FASTA (ORF) (Full)