Construct: ORF ccsbBroadEn_09315

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000158.1_s300c1, BRDN0000396571
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACBD5 (91452)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 91452 ACBD5 acyl-CoA binding domain con... NM_001042473.4 99.8% 100% 6G>A;414A>G
2 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352577.2 99.8% 100% 6G>A;414A>G
3 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352578.1 99.8% 100% 6G>A;414A>G
4 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352579.1 99.8% 100% 6G>A;414A>G
5 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352574.2 97.6% 97.8% 6G>A;384_416del;447A>G
6 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352575.2 97.6% 97.8% 6G>A;384_416del;447A>G
7 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352576.1 97.6% 97.8% 6G>A;384_416del;447A>G
8 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016896.1 97.6% 97.7% (many diffs)
9 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352580.2 96.2% 96.3% 6G>A;383_384ins54
10 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016895.2 95.5% 95.6% (many diffs)
11 human 91452 ACBD5 acyl-CoA binding domain con... NM_001271512.3 93.5% 93.6% 1_99del;105G>A;513A>G
12 human 91452 ACBD5 acyl-CoA binding domain con... NM_145698.5 93.2% 93.3% 1_105del;111G>A;519A>G
13 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352572.1 91.9% 92.1% 1_126del;132G>A;540A>G
14 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352571.1 91.6% 91.7% (many diffs)
15 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352569.1 91.2% 91.4% (many diffs)
16 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352570.1 91.2% 91.3% (many diffs)
17 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352573.1 90.8% 89.4% (many diffs)
18 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352568.1 90.1% 90.2% (many diffs)
19 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016889.2 90% 90.2% (many diffs)
20 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016888.2 89.4% 89.5% (many diffs)
21 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016887.2 88.2% 88.4% (many diffs)
22 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352582.2 85.9% 86.1% 6G>A;414A>G;519_520ins204
23 human 91452 ACBD5 acyl-CoA binding domain con... NM_001301251.2 84.8% 84.8% 0_1ins222;192A>G
24 human 91452 ACBD5 acyl-CoA binding domain con... NM_001301252.2 84.8% 84.8% 0_1ins222;192A>G
25 human 91452 ACBD5 acyl-CoA binding domain con... NM_001301253.2 84.8% 84.8% 0_1ins222;192A>G
26 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352583.1 84.8% 84.8% 0_1ins222;192A>G
27 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352584.1 84.8% 84.8% 0_1ins222;192A>G
28 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016886.2 83% 83.1% 1_297del;303G>A;711A>G
29 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352585.1 82.9% 83% 0_1ins222;162_194del;225A>G
30 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016902.1 82.9% 83% 0_1ins222;162_194del;225A>G
31 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016904.1 82.9% 82.9% (many diffs)
32 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016905.1 82.9% 82.9% (many diffs)
33 human 91452 ACBD5 acyl-CoA binding domain con... XM_006717528.4 81.5% 81.6% (many diffs)
34 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016885.2 81.5% 81.6% (many diffs)
35 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016900.1 81.1% 81.1% (many diffs)
36 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016901.1 81.1% 81.1% (many diffs)
37 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352587.1 80.5% 80.6% (many diffs)
38 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352588.1 80.2% 80.3% (many diffs)
39 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016884.2 80% 80.1% (many diffs)
40 human 91452 ACBD5 acyl-CoA binding domain con... XM_024448249.1 79.1% 79.3% (many diffs)
41 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352586.1 78.9% 79% (many diffs)
42 human 91452 ACBD5 acyl-CoA binding domain con... NM_001352581.1 78.6% 78.7% (many diffs)
43 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016898.2 78.5% 78.6% (many diffs)
44 human 91452 ACBD5 acyl-CoA binding domain con... XM_024448248.1 76.9% 77% (many diffs)
45 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016894.2 71.5% 71.6% (many diffs)
46 human 91452 ACBD5 acyl-CoA binding domain con... NM_001301254.2 70.9% 71% 0_1ins222;192A>G;297_298ins204
47 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016893.2 70.1% 70.2% (many diffs)
48 human 91452 ACBD5 acyl-CoA binding domain con... XM_017016890.2 68.8% 68.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1536
ORF length:
1470
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC AGACACGAGA TCCGTGCACG AGACTAGGTT TGAGGCGGCC GTGAAGGTGA
121TCCAGAGTTT GCCGAAGAAT GGTTCATTCC AGCCAACAAA TGAAATGATG CTTAAATTTT
181ATAGCTTCTA TAAGCAGGCA ACTGAAGGAC CCTGTAAACT TTCAAGGCCT GGATTTTGGG
241ATCCTATTGG AAGATATAAA TGGGATGCTT GGAGTTCACT GGGTGATATG ACCAAAGAGG
301AAGCCATGAT TGCATATGTT GAAGAAATGA AAAAGATTAT TGAAACTATG CCAATGACTG
361AGAAAGTTGA AGAATTGCTG CGTGTCATAG GTCCATTTTA TGAAATTGTC GAGGACAAAA
421AGAGTGGCAG GAGTTCTGAT ATAACCTCAG ATCTTGGTAA TGTTCTCACT TCTACTCCGA
481ACGCCAAAAC CGTTAATGGT AAAGCTGAAA GCAGTGACAG TGGAGCCGAG TCTGAGGAAG
541AAGAGGCCCA AGAAGAAGTG AAAGGAGCAG AACAAAGTGA TAATGATAAG AAAATGATGA
601AGAAGTCAGC AGACCATAAG AATTTGGAAG TCATTGTCAC TAATGGCTAT GATAAAGATG
661GCTTTGTTCA GGATATACAG AATGACATTC ATGCCAGTTC TTCCCTGAAT GGCAGAAGCA
721CTGAAGAAGT AAAGCCCATT GATGAAAACT TGGGGCAAAC TGGAAAATCT GCTGTTTGCA
781TTCACCAAGA TATAAATGAT GATCATGTTG AAGATGTTAC AGGAATTCAG CATTTGACAA
841GCGATTCAGA CAGTGAAGTT TACTGTGATT CTATGGAACA ATTTGGACAA GAAGAGTCTT
901TAGACAGCTT TACGTCCAAC AATGGACCAT TTCAGTATTA CTTGGGTGGT CATTCCAGTC
961AACCCATGGA AAATTCTGGA TTTCGTGAAG ATATTCAAGT ACCTCCTGGA AATGGCAACA
1021TTGGGAATAT GCAGGTGGTT GCAGTTGAAG GAAAAGGTGA AGTCAAGCAT GGAGGAGAAG
1081ATGGCAGGAA TAACAGCGGA GCACCACACC GGGAGAAGCG AGGCGGAGAA ACTGACGAAT
1141TCTCTAATGT TAGAAGAGGA AGAGGACATA GGATGCAACA CTTGAGCGAA GGAACCAAGG
1201GCCGGCAGGT GGGAAGTGGA GGTGATGGGG AGCGCTGGGG CTCCGACAGA GGGTCCCGAG
1261GCAGCCTCAA TGAGCAGATC GCCCTCGTGC TGATGAGACT GCAGGAGGAC ATGCAGAATG
1321TCCTTCAGAG ACTGCAGAAA CTGGAAACGC TGACTGCTTT GCAGGCAAAA TCATCAACAT
1381CAACATTGCA GACTGCTCCT CAGCCCACCT CACAGAGACC ATCTTGGTGG CCCTTCGAGA
1441TGTCTCCTGG TGTGCTAACG TTTGCCATCA TATGGCCTTT TATTGCACAG TGGTTGGTGT
1501ATTTATACTA TCAAAGAAGG AGAAGAAAAC TGAACTGCCC AACTTTCTTG TACAAAGTtg
1561gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)