Construct: ORF ccsbBroadEn_09545

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008806.1_s300c1, BRDN0000389462
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TRAM1L1 (133022)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 133022 TRAM1L1 translocation associated me... NM_152402.3 99.8% 99.7% 176T>C;732A>G
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1173
ORF length:
1107
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GCTCCGTAAG AAGAGCACCA AGAACCCCCC CGTTCTCAGC CAGGAATTCA
121TCCTGCAGAA TCATGCGGAC ATCGTCTCCT GCGTGGGGAT GTTCTTCCTG CTGGGGCTTG
181TGTTCGAGGG AACAGCAGAA GCATCCATCG TGTTTCTCAC TCTTCAGCAC AGTGTTGCTG
241CCCCTGCAGC AGAGGAACAA GCCACGGGCT CAAAGTCCCT CTATTATTAT GGTGTCAAAG
301ATTTGGCCAC GGTTTTCTTC TACATGCTGG TGGCAATCAT TATTCATGCC ACAATTCAGG
361AATATGTGTT GGATAAAATT AACAAGAGAA TGCAGTTCAC CAAAGCGAAA CAAAACAAGT
421TTAACGAGTC TGGTCAGTTT AGTGTGTTCT ACTTTTTTTC TTGTATTTGG GGCACATTCA
481TTTTAATCTC TGAAAACTGC CTGTCAGACC CAACTCTTAT ATGGAAGGCT CGTCCCCATA
541GCATGATGAC ATTTCAAATG AAGTTTTTCT ACATATCCCA GTTGGCTTAC TGGTTTCATG
601CTTTTCCTGA ACTCTACTTC CAGAAAACCA AAAAACAAGA CATCCCTCGT CAACTTGTCT
661ACATTGGTCT TCACCTCTTC CACATTACTG GAGCTTATCT CTTGTACTTG AATCATTTGG
721GACTTCTTCT TTTGGTACTG CATTATTTTG TTGAATTACT TTCCCACATG TGCGGCCTGT
781TTTACTTTAG TGATGAGAAG TACCAGAAAG GCATATCTCT GTGGGCCATT GTGTTTATCT
841TGGGTAGACT TGTGACTTTA ATTGTTTCCG TACTCACTGT TGGGTTTCAC CTGGCTGGAT
901CGCAGAATCG GAATCCTGAT GCCCTTACTG GAAATGTAAA TGTGTTGGCA GCTAAAATTG
961CTGTTCTGTC GTCCAGTTGC ACGATCCAAG CCTACGTAAC ATGGAACTTA ATTACTCTCT
1021GGCTTCAGAG GTGGGTAGAA GATTCTAATA TTCAGGCCTC ATGTATGAAA AAGAAACGGT
1081CGAGATCTTC TAAAAAAAGA ACAGAAAACG GAGTGGGAGT GGAAACTTCA AATAGAGTAG
1141ACTGTCCGCC AAAGAGGAAA GAGAAATCTT CATACCCACT TTCTTGTACA AAGTtggcat
1201tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)