Construct: ORF ccsbBroadEn_09571

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001360.1_s300c1, BRDN0000456336
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GOT1L1 (137362)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 137362 GOT1L1 glutamic-oxaloacetic transa... NM_152413.3 99.9% 99.7% 668A>G
2 human 137362 GOT1L1 glutamic-oxaloacetic transa... XM_005273399.3 99.6% 99.5% 517_518insAGC;665A>G
3 human 137362 GOT1L1 glutamic-oxaloacetic transa... XM_006716285.3 92.5% 92.3% 517_518ins93;575A>G
4 human 137362 GOT1L1 glutamic-oxaloacetic transa... XM_024447059.1 56.6% 56.5% 0_1ins546;122A>G
5 human 137362 GOT1L1 glutamic-oxaloacetic transa... XR_949376.2 53% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1329
ORF length:
1263
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC CACCCTTTCA GTGTTCATGG ATGTGCCCCT CGCCCACAAG CTAGAGGGCA
121GCTTGTTAAA GACCTACAAA CAAGATGATT ACCCGAACAA GATATTCTTA GCCTATAGAG
181TCTGCATGAC AAATGAAGGC CATCCCTGGG TTTCTCTCGT GGTGCAGAAG ACTCGACTAC
241AGATTTCACA GGATCCCTCC CTGAATTATG AGTACTTGCC CACCATGGGC CTGAAATCAT
301TCATCCAGGC CTCTCTAGCA CTCCTCTTTG GAAAGCACAG CCAAGCCATT GTGGAGAACA
361GGGTAGGGGG TGTACACACT GTTGGTGACA GTGGTGCCTT CCAGCTTGGC GTCCAGTTTC
421TCAGAGCTTG GCATAAGGAT GCTCGTATAG TTTACATCAT CTCTTCTCAA AAAGAACTGC
481ATGGACTCGT CTTCCAGGAC ATGGGCTTTA CAGTTTATGA ATACTCTGTC TGGGACCCCA
541AGAAGCTATG CATGGACCCC GACATACTCC TCAATGTGGT GGAGCAGATC CCACATGGCT
601GTGTCCTTGT GATGGGGAAC ATTATCGACT GCAAGTTGAC ACCAAGTGGG TGGGCAAAGT
661TGATGTCCAT GATAAAGAGC AAGCAGATAT TCCCATTTTT TGATATTCCC TGTCAAGGTT
721TATACACCAG TGGCTTGGAA GAAGATACTA GAATCTTACA ATACTTTGTG TCTCAAGGCT
781TTGAGTTCTT CTGCAGCCAG TCTCTGTCCA AGAATTTTGG CATTTATGAT GAAGGAGTGG
841GGATGCTAGT GGTGGTGGCA GTCAACAACC AGCAGCTGCT GTGTGTCCTC TCCCAGCTGG
901AAGGATTAGC CCAGGCCCTG TGGCTAAACC CCCCCAACAC GGGTGCACGT GTCATCACCT
961CCATCCTCTG CAACCCTGCT CTGCTGGGAG AATGGAAGCA GAGTCTAAAA GAAGTTGTAG
1021AGAACATCAT GCTAACCAAG GAAAAAGTGA AGGAGAAACT CCAGCTCCTG GGAACCCCTG
1081GGTCCTGGGG TCACATCACC GAGCAGAGTG GGACCCACGG CTATCTTGGA CTCAACTCCC
1141AGCAGGTGGA ATACCTGGTC AGGAAGAAGC ACATCTATAT CCCCAAGAAC GGTCAGATTA
1201ACTTCAGCTG TATCAATGCC AACAACATAA ATTACATCAC TGAGGGCATC AATGAGGCTG
1261TCCTCCTCAC AGAGAGCTCA GAGATGTGTC TTCCAAAGGA AAAAAAAACA CTGATTGGAA
1321TAAAACTTTA CCCAACTTTC TTGTACAAAG TTGGcattat aagaaagcat tgcttatcaa
1381tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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