Construct: ORF ccsbBroadEn_09702

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009571.1_s300c1, BRDN0000394862
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SH3RF2 (153769)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 153769 SH3RF2 SH3 domain containing ring ... NM_152550.4 99.8% 99.5% 799C>T;1774T>C;2129G>C
2 human 153769 SH3RF2 SH3 domain containing ring ... XM_006714757.1 99.8% 99.5% 799C>T;1774T>C;2129G>C
3 human 153769 SH3RF2 SH3 domain containing ring ... XM_011537569.2 99.8% 99.5% 799C>T;1774T>C;2129G>C
4 human 153769 SH3RF2 SH3 domain containing ring ... XM_017009136.1 99.8% 99.5% 799C>T;1774T>C;2129G>C
5 human 153769 SH3RF2 SH3 domain containing ring ... XM_005268380.2 99% 98.6% (many diffs)
6 human 153769 SH3RF2 SH3 domain containing ring ... XM_011537567.2 99% 98.6% (many diffs)
7 human 153769 SH3RF2 SH3 domain containing ring ... XM_011537568.2 99% 98.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2256
ORF length:
2187
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGATGATTTG ACGTTACTTG ATCTTCTGGA GTGCCCTGTG TGCTTTGAGA
121AGCTCGATGT CACAGCCAAA GTCCTCCCTT GCCAGCACAC CTTCTGCAAA CCATGTCTAC
181AGAGGGTTTT CAAGGCCCAC AAAGAGCTGC GGTGCCCCGA ATGCAGGACG CCTGTGTTTT
241CCAACATTGA GGCGCTGCCG GCCAACCTGC TGCTCGTGCG CCTTCTGGAT GGAGTGCGCT
301CAGGGCAGAG CTCCGGGAGA GGGGGCTCCT TCCGCAGGCC TGGCACGATG ACCTTGCAGG
361ATGGCAGGAA AAGCAGGACC AACCCCAGAC GTCTGCAGGC CAGTCCTTTC CGGCTAGTGC
421CTAATGTCAG AATCCACATG GATGGGGTGC CTCGAGCAAA GGCCTTATGC AACTACAGAG
481GGCAGAATCC CGGTGACCTA AGGTTTAATA AGGGAGATAT CATCCTTCTC CGGAGACAGC
541TTGATGAGAA TTGGTACCAG GGGGAAATCA ATGGCATCAG CGGGAACTTC CCAGCCAGCT
601CCGTGGAAGT CATCAAGCAG CTGCCCCAGC CGCCCCCGCT CTGCAGGGCC CTCTACAACT
661TCGACCTACG AGGCAAGGAC AAGAGTGAGA ACCAGGATTG CCTGACCTTC CTCAAGGACG
721ATATCATCAC TGTGATCAGC CGAGTGGATG AGAACTGGGC AGAAGGCAAG TTAGGAGATA
781AAGTAGGCAT CTTCCCTATC TTGTTTGTAG AGCCAAACCT CACCGCAAGA CACCTTTTAG
841AGAAGAACAA AGGTCGCCAG TCATCCTGCA CAAAAAACCT GTCCCTGGTG TCCTCGTCCT
901CCAGAGGCAA CACGTCTACC CTCCGTAGGG GCCCAGGGTC CAGGAGGAAG GTGCCTGGGC
961AGTTTTCCAT CACAACAGCC TTGAACACTC TCAACCGGAT GGTCCATTCT CCTTCAGGGC
1021GCCATATGGT AGAGATCAGC ACCCCAGTGC TCATCAGCTC CAGCAACCCC TCTGTGATCA
1081CCCAGCCCAT GGAGAAAGCA GACGTTCCTT CCAGCTGTGT GGGACAGGTC AGCACTTATC
1141ACCCCGCACC TGTCTCTCCA GGACATTCCA CAGCCGTGGT CAGTCTGCCT GGCTCCCAGC
1201AACACCTCTC AGCGAACATG TTTGTAGCCC TGCACTCCTA CTCAGCCCAT GGACCCGATG
1261AGCTGGACCT GCAAAAGGGA GAAGGCGTCA GGGTCCTGGG GAAGTGCCAG GACGGCTGGC
1321TCAGGGGCGT CTCCTTGGTC ACCGGGCGAG TCGGCATCTT CCCAAACAAT TACGTCATCC
1381CCATTTTCAG AAAGACCTCT AGTTTTCCAG ACTCCCGGAG CCCTGGTCTC TACACCACAT
1441GGACGTTATC CACCTCCTCT GTGTCCTCCC AAGGCAGCAT TTCAGAAGGT GATCCACGGC
1501AAAGCCGTCC CTTCAAATCC GTCTTTGTGC CCACTGCCAT AGTCAACCCC GTGAGAAGCA
1561CAGCCGGCCC TGGGACTTTA GGACAAGGGT CTCTTCGGAA AGGGCGGAGC AGCATGAGAA
1621AGAATGGATC CCTGCAGAGA CCCCTCCAGT CCGGGATCCC CACTCTCGTG GTAGGCTCCC
1681TCAGACGCAG CCCCACCATG GTCCTTCGGC CTCAGCAGTT CCAATTCTAC CAGCCACAGG
1741GGATCCCCTC CTCCCCCTCA GCCGTGGTGG TGGAGATGGG GTCCAAGCCT GCCCTCACGG
1801GGGAGCCCGC CCTCACGTGC ATCAGCAGGG GCAGTGAGGC CCGGATCCAC TCCGCGGCCA
1861GCTCCCTCAT TATGGAAGAC AAAGAAATCC CCATCAAGAG TGAGCCTCTG CCAAAACCGC
1921CCGCATCTGC CCCACCATCC ATCCTGGTGA AACCAGAAAA CTCAAGAAAT GGCATCGAAA
1981AGCAAGTCAA AACCGTGAGA TTTCAGAATT ACAGCCCTCC TCCCACCAAA CATTACACCT
2041CCCATCCCAC CTCCGGAAAG CCTGAACAGC CAGCCACCCT CAAGGCGTCC CAGCCTGAAG
2101CAGCGTCCTT GGGCCCAGAG ATGACCGTCC TATTTGCCCA CCGAAGTGGC TGCCACTCCG
2161GACAGCAGAC AGACCTCCGG AGAAAGTCAG CTCTTGCCAA GGCCACAACC CTGGTGTCCA
2221CTGCCTCAGG CACGCAGACC GTGTTTCCCA GCAAATTGCC AACTTTCTTG TACAAAGTtg
2281gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.