Construct: ORF ccsbBroadEn_09722

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008753.1_s300c1, BRDN0000456717
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF782 (158431)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 158431 ZNF782 zinc finger protein 782 NM_001001662.3 99.9% 99.8% 1819G>T
2 human 158431 ZNF782 zinc finger protein 782 NM_001346991.2 99.9% 99.8% 1819G>T
3 human 158431 ZNF782 zinc finger protein 782 XM_011518315.2 99.9% 99.8% 1819G>T
4 human 158431 ZNF782 zinc finger protein 782 XM_011518318.3 99.9% 99.8% 1819G>T
5 human 158431 ZNF782 zinc finger protein 782 XM_011518320.2 99% 98.9% 12_13insCAGGCATCAGTGTCATTC;1801G>T
6 human 158431 ZNF782 zinc finger protein 782 XM_017014343.2 99% 98.9% 12_13insCAGGCATCAGTGTCATTC;1801G>T
7 human 158431 ZNF782 zinc finger protein 782 NM_001346993.2 96.5% 96.4% 0_1ins72;1747G>T
8 human 158431 ZNF782 zinc finger protein 782 NM_001346995.2 81% 80.9% 0_1ins396;1423G>T
9 human 158431 ZNF782 zinc finger protein 782 XM_024447430.1 81% 80.9% 0_1ins396;1423G>T
10 human 158431 ZNF782 zinc finger protein 782 XM_024447431.1 81% 80.9% 0_1ins396;1423G>T
11 human 158431 ZNF782 zinc finger protein 782 XR_001746208.2 47.4% 1_229del;2048G>T;2327_4413del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2166
ORF length:
2097
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAACACATTT CAGGCATCAG TGTCATTCCA GGACGTGACT GTGGAATTCA
121GCCAGGAGGA GTGGCAGCAC ATGGGCCCTG TTGAGAGGAC CCTGTACAGA GATGTGATGC
181TGGAGAACTA CAGCCACCTC GTCTCAGTGG GCTACTGCTT TACAAAACCA GAACTGATCT
241TCACATTGGA ACAAGGAGAA GATCCATGGT TATTAGAGAA AGAGAAAGGA TTTCTAAGCA
301GGAACTCCCC AGAAGACTCC CAACCTGATG AAATCTCAGA GAAGAGCCCA GAAAATCAAG
361GCAAACATTT GTTGCAAGTT TTATTCACCA ATAAATTATT GACTACAGAG CAAGAAATTT
421CAGGAAAACC ACATAATCGA GACATAAACA TTTTTCGTGC AAGAATGATG CCTTGTAAAT
481GTGACATTGC GGGGTCTGCT TGCCAGGGGC TCAGCCTGAT GGCCCCACAC TGTCAGTATT
541CAAAAGAAAA GGCTCATGAG CGTAATGTTT GTGACAAATG GCTCATCAGT ATTAAGGATG
601GCAGAACTAA CACTCAAGAG AAATCTTTCG CTTATAGTAA AATTGTGAAA ACCCTCCATC
661ATAAGGAGGA AGTTATTCAA CATCAGACAA TTCAGACTCT GGGGCAAGAT TTTGAATATA
721ATGAAAGTAG AAAAGCTTTT CTTGAAAAGG CTGCCCTTGT TACATCTAAC AGTACCCACC
781CAAAAGGAAA ATCTTACAAT TTCAATAAAT TTGGGGAAAA CAAATATGAT AAATCAACCT
841TTATTATTCC TCAGAACATG AATCCAGAGA AGAGTCACTA TGAGTTTAAT GATACTGGAA
901ATTGTTTCTG TAGAATCACT CACAAAACTC TCACAGGAGG GAAATCCTTC AGCCAAAAGT
961CACACATTAG AGAACATCAT AGAGTTCATA TAGGGGTGAA ACCCTTTGAA TATGGAAAAA
1021GTTTCAACCG TAATTCAACC CTCCCAGTGC ATCAGAGAAC TCATGCAACA GATAAATACT
1081CTGATTATCA CCCATGTACA GAGACATTCA GCTACCAGTC AACTTTCAGT GTACATCAGA
1141AGGTTCACAT AAGGGCAAAA CCCTATGAGT ATAATGAATG TGGGAAATCC TGCTCTATGA
1201ATTCACACTT GATTTGGCCT CAGAAAAGTC ACACAGGGGA GAAACCCTAT GAATGTCCTG
1261AGTGCGGGAA AGCCTTCAGT GAGAAGTCAC GCCTAAGAAA ACATCAGAGA ACTCACACGG
1321GAGAGAAACC ATACAAATGT GATGGATGTG ATAAAGCTTT CAGTGCAAAG TCAGGCCTAA
1381GAATACACCA GAGAACCCAC ACAGGGGAGA AACCATTCGA ATGTCATGAA TGTGGGAAAT
1441CTTTTAACTA TAAGTCAATC CTCATAGTGC ATCAGAGAAC TCACACAGGG GAGAAACCTT
1501TTGAATGTAA TGAATGCGGG AAATCTTTCA GCCATATGTC AGGCCTAAGG AATCACCGAA
1561GAACTCACAC AGGGGAAAGA CCATATAAAT GTGATGAATG TGGGAAAGCT TTCAAACTGA
1621AGTCAGGCCT GAGGAAACAT CATAGAACAC ACACAGGGGA GAAGCCCTAC AAATGTAATC
1681AGTGTGGAAA AGCTTTCGGT CAGAAATCAC AACTCAGAGG ACATCATAGA ATTCACACAG
1741GGGAAAAACC CTATAAATGT AATCATTGTG GGGAAGCTTT CAGTCAGAAA TCAAACCTCA
1801GAGTACATCA CAGAACTCAT ACTGGGGAGA AACCCTATCA ATGTGAGGAG TGTGGAAAAA
1861CATTCAGGCA GAAATCAAAT CTCAGATGGC ATCAGAGAAC TCACACTGGG GAGAAGCCCT
1921ATGAATGTAA TGAATGTGGA AAAGCTTTCA GTGAGAAGTC AGTCCTAAGA AAACATCAGC
1981GAACTCACAC CGGGGAGAAA CCATATAATT GTAATCAGTG TGGGGAAGCT TTCAGTCAGA
2041AATCCAATCT CAGAGTACAT CAGAGAACTC ACACAGGGGA GAAACCCTAT AAATGTGATA
2101AATGTGGGAG AACTTTCAGT CAAAAATCAA GCCTTAGAGA ACATCAGAAA GCCCACCCAG
2161GGGATTTGCC AACTTTCTTG TACAAAGTTG Gcattataag aaagcattgc ttatcaattt
2221gttgcaacga ac

Download FASTA (ORF) (Full)