Construct: ORF ccsbBroadEn_09858

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012434.1_s300c1, BRDN0000385497
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DDIAS (220042)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 220042 DDIAS DNA damage induced apoptosi... NM_001363481.2 99.8% 99.6% 650T>C;1380G>T;2524G>A
2 human 220042 DDIAS DNA damage induced apoptosi... NM_145018.4 99.8% 99.6% 650T>C;1380G>T;2524G>A
3 human 220042 DDIAS DNA damage induced apoptosi... XM_011544836.2 99.8% 99.6% 650T>C;1380G>T;2524G>A
4 human 220042 DDIAS DNA damage induced apoptosi... XM_024448400.1 99.8% 99.6% 650T>C;1380G>T;2524G>A
5 human 220042 DDIAS DNA damage induced apoptosi... XM_011544837.1 69.7% 69.6% 0_1ins903;477G>T;1621G>A
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3060
ORF length:
2994
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA CAGAAGACGA AAATTTCTTC TAGCCTCAGT ACTTGCTCTC CAGAATTCAA
121GTTTTATATA TCCATCATGT CAGAAGTGCT TCTCTAGGAT AATCCTGGTC TCCAAAAGGT
181CTAATTGTCC AAAATGTGGC TCTACTGGTG AATCTGGAAA TGCCAATTAC AGATACAAAC
241TTTCCTTAAA AGTTGCAGAA TCAAACAAAT TGTTTGTTAT TACTGTATTT GGAAGTTGCT
301TAGATACATT TTTTGGTCTT ACTGCCACTG GTTTGCACAG GTACATTCAG GATCCTAATA
361AAATTCCAGA AACACTGGAC AATGATACAA CTCAGAATCT ATTAACTAAA GCAGTTGAAA
421CTTGCTTTGT TGGACAAAGC TTTATTTTTG GAGTGACGAA TTTTGAAAAC CAACCTGGAC
481AAGGTTCAGA TGCCAGTAAC TTCTTACAGC AATGCTCTGA CCACAAAAGA AAAGCCAAAG
541CACTAGTGGC TTGCCAGATT GTTCTACCAG ACCCAGGTAT TGCAGGCTTT ACTGTCATTG
601ACTACTTCCA TCAACTTTTG CAGACTTTTA ATTTCAGGAA ACTTCAGTGT GACTCTCAGG
661CACCTAACAA TCACTTACTT GCTTTAGATC ACTCAAATAG TGATCTCAGC AGCACATATA
721CTTCTGACAG CACTTCTGAT TTTTTCAAGT CCTGCAGCAA GGATACTTTT TCAAAATTCT
781GGCAGCCATC ACTTGAATTC ACTTGCATTG TTTCACAACT AACAGATAAT GATGATTTTT
841CAGCTTCAGA ACAAAGTAAG GCCTTTGGTA CTCTTCAGCA GAACAGAAAG TCCATCTCCA
901TTGCAGAGGC CACTGGTTCC AGTAGCTGCC ATGATCCCAT TCAGGATTCA TGGAGCCTTG
961TTTCATATAT GGATAAAAAG AGTACAGCAG AAAAGTTGGG TAAAGAACTT GGCTTACAAG
1021CTAAGGAGCT GAGTGCAGTT CACAGCAGTC ATCATGAAAT TGGAGTTAAT GACTCTAATT
1081TATTCTCTTT GGAAATGCGA GAGCCCCTTG AGTCAAGTAA TACAAAATCC TTCCACAGTG
1141CAGTGGAAAT TAAAAATAGG TCCCAGCATG AGCTACCATG TTTTCAGCAT CATGGTATAG
1201ATACCCCAAC TAGCCTTCAG AAGAGATCTG CATGTTGTCC ACCTTCGTTA CTCAGACTTG
1261AAGAGACAGC CAGCAGTTCC CAGGATGGTG ACCCTCAAAT TTGGGATGAT CTGCCATTCT
1321CTGAAAGCCT GAACAAGTTT CTGGCAGTTC TTGAAAGTGA GATTGCTGTA ACCCAGGCAG
1381ATGTCAGTAG TAGGAAACAT CATGTAGATA ATGACATTGA TAAATTTCAT GCAGACCACA
1441GCAGTTTATC TGTGACTCCC CAGAGAACTA CTGGAGCCCT GCATACACCA CCTATAGCTT
1501TAAGATCATC ACAAGTAATA GTCAAAGCAA ACTGTAGCAA AGATGACTTC CTTTTCAACT
1561GTAAAGGAAA TCTAAGTCCT AGTGTTGAAA AGGAGTCACA ACCAGATAAC AAAGTAGAGG
1621CTGTCTCTGT AAATCATAAT GGAAGAGATA TGTCAGAATA TTTTTTACCG AATCCTTACC
1681TGTCAGCTCT GTCTTCATCT TCAAAAGATT TAGAAACAAT AGTTACTCTT AAGAAGACTA
1741TCAGAATCTC ACCACACAGG GAGAGTGACC ATTCTAGTCT AAATAACAAA TATTTGAATG
1801GATGTGGAGA AATATCAGTT TCAGAAATGA ATGAAAAGTT GACAACTCTG TGTTATAGGA
1861AGTATAATGA TGTCTCTGAT CTTTGCAAAT TAGAAAATAA ACAATATTGT AGGTGGTCCA
1921AGAACCAAGA TGACAGTTTT ACAATTTGCA GGAAACTTAC ATATCCTTTA GAAACTCTTT
1981GCAATAGTCC AAATAGAAGT ACAAATACAT TGAAAGAAAT GCCTTGGGGA CATATCAATA
2041ACAACGTAAC ACAGAGCTAT TCTATTGGTT ATGAAGGTAG CTATGATGCC TCTGCTGATC
2101TCTTTGATGA TATTGCTAAA GAAATGGACA TTGCAACTGA GATTACCAAA AAATCACAGG
2161ATATTTTGTT AAAATGGGGA ACATCTTTGG CAGAAAGTCA CCCTTCAGAG TCTGATTTTT
2221CACTGAGATC ACTTTCTGAA GACTTCATCC AGCCTTCACA AAAATTATCC TTGCAAAGCC
2281TATCTGACTC TAGGCATTCA AGAACATGCT CTCCAACACC TCATTTTCAA TCAGATTCAG
2341AATATAATTT TGAAAATAGT CAAGACTTTG TTCCATGTTC ACAGTCAACT CCAATTTCAG
2401GGTTCCACCA AACAAGAATT CATGGGATAA ACAGAGCTTT CAAAAAACCT GTATTTTATT
2461CAGATCTTGA TGGTAACTAT GAAAAAATAA GGATTTTCCC TGAAAATGAC AAACAGCAAG
2521CCAGCCCAAG CTGTCCAAAA AATATAAAAA CACCTAGCCA GAAAATCAGA AGCCCTATTG
2581TATCTGGTAT TTCACAACCA GACGTTTTCA ATCACTACCC TTTTGCTGAG TGCCATGAAA
2641CTGATAGTGA TGAATGGGTC CCTCCTACCA CACAAAAAAT ATTTCCTTCA GATATGCTTG
2701GATTCCAAGG CATAGGTCTA GGGAAATGCC TTGCTGCCTA TCATTTCCCT GATCAACAAG
2761AGTTACCAAG AAAGAAACTG AAACATATTA GACAAGGAAC CAATAAAGGT TTAATTAAGA
2821AGAAATTAAA GAATATGCTT GCAGCAGTTG TTACGAAAAA GAAAACTCAT AAATATAACT
2881GTAAAAGTTC AGGCTGGATT TCCAAATGTC CAGACATTCA AGTCTTAGCA GCACCTCAGC
2941TGCACCCTAT TCTTGGACCT GATTCTTGTT CAGAAGTCAA ATGTTGCCTT CCATTTTCAG
3001AAAAAGGCCC ACCTTCAGTG TGTGAAACTC GAAGTGCTTG GTCACCTGAA TTGTTTTCAT
3061ACCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
3121acgaac

Download FASTA (ORF) (Full)