Construct: ORF ccsbBroadEn_10283

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008499.1_s300c1, BRDN0000384913
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CYTOR (112597)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 112597 CYTOR cytoskeleton regulator RNA NR_024206.2 28.7% 1_267del;424_542del
2 human 112597 CYTOR cytoskeleton regulator RNA NR_146460.1 27.3% 1_296del;453_571del
3 human 541471 MIR4435-2HG MIR4435-2 host gene NR_024373.2 25.3% (many diffs)
4 human 112597 CYTOR cytoskeleton regulator RNA NR_024205.3 23% 1_413del;570_677del
5 human 112597 CYTOR cytoskeleton regulator RNA NR_146461.1 21.3% 1_468del;625_732del
6 human 112597 CYTOR cytoskeleton regulator RNA NR_024204.2 18.3% 1_577del;734_852del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
222
ORF length:
156
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC AGACACCGAA AATCACGACT CAGCCCCCTC CAGCACCTCT ACCTGTTGCC
121CGCCGATCAC AGCCGGAATG CAGCTGAAAG ATTCCCTGGG GCCTGGTTCC AACCGCCCAC
181TGTGGACTCT GAGGCCTCTG CATTTGCGGG TGGTCTGCCT GTGCCCAACT TTCTTGTACA
241AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)