Construct: ORF ccsbBroadEn_10486

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005538.1_s300c1, BRDN0000385286
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZBTB8A (653121)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 653121 ZBTB8A zinc finger and BTB domain ... NM_001040441.3 99.8% 99.5% 8T>A;1321A>T
2 human 653121 ZBTB8A zinc finger and BTB domain ... NM_001291496.2 77% 75.2% 8T>A;993_994ins181;1020_1021ins122
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1389
ORF length:
1323
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA GAACTCCTCT CATCAGTCTC ACCTCCTGCA GCAACTGAAC GAGCAGCGCA
121GGCAAGATGT ATTTTGTGAC TGCAGTATTC TAGTTGAAGG GAAGGTCTTC AAAGCACATC
181GAAATGTATT ATTCGCTAGT AGCGGCTACT TTAAAATGCT TCTTTCTCAG AATTCAAAGG
241AGACGAGTCA GCCAACCACA GCTACATTTC AGGCTTTCTC CCCTGACACT TTTACAGTTA
301TCTTGGACTT CGTATATTCT GGCAAACTGT CTCTTACTGG TCAGAATGTC ATAGAAGTGA
361TGTCGGCTGC TAGCTTCCTT CAGATGACTG ATGTCATAAG TGTATGTAAG ACTTTTATTA
421AATCTTCCTT AGACATTAGT GAGAAAGAAA AAGATCGCTA TTTCAGTCTC TCAGATAAAG
481ATGCCAATTC TAATGGTGTA GAACGTTCCT CTTTTTATAG TGGTGGCTGG CAAGAAGGAA
541GCAGTTCTCC ACGTTCTCAC CTAAGCCCAG AGCAAGGAAC AGGTATAATA AGTGGAAAAT
601CTTGGAATAA GTATAATTAT CATCCAGCCT CCCAGAAGAA TACTCAACAA CCCTTGGCCA
661AGCATGAACC AAGGAAAGAG TCCATTAAAA AGACCAAACA TTTGAGATTG TCACAGCCTT
721CTGAAGTTAC TCATTATAAG TCAAGCAAAC GAGAAGTACG AACATCTGAT TCTTCCAGCC
781ATGTTTCCCA GTCTGAAGAA CAAGCACAGA TTGATGCTGA AATGGACTCT ACTCCTGTTG
841GCTATCAGTA CGGTCAAGGA TCTGATGTCA CATCCAAAAG CTTTCCAGAT GATCTGCCTC
901GGATGCGATT CAAGTGCCCG TACTGCACAC ATGTGGTGAA GCGGAAGGCA GACCTAAAGC
961GCCACCTTCG TTGTCATACA GGAGAAAGGC CCTATCCATG TCAAGCTTGT GGAAAAAGAT
1021TTAGCAGGCT AGACCATCTA AGTAGCCATT TTCGAACAAT TCACCAGGCA TGTAAACTCA
1081TCTGCAGAAA ATGTAAACGT CATGTGACAG ATCTAACAGG GCAAGTGGTA CAGGAGGGAA
1141CCAGGCGCTA CAGACTGTGT AATGAGTGTC TTGCAGAATT TGGCATAGAC AGCCTCCCCA
1201TTGACTTGGA AGCTGAACAA CATCTTATGT CCCCATCAGA TGGAGATAAG GATTCCAGAT
1261GGCACTTGAG TGAAGATGAG AATAGATCCT ATGTGGAGAT TGTAGAAGAT GGGTCTGCTG
1321ATCTGGTCAT CCAACAGGTT GATGATAGTG AAGAAGAAGA AGAAAAAGAA ATTAAGCCCA
1381ACATTTGGTA CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt gcttatcaat
1441ttgttgcaac gaac

Download FASTA (ORF) (Full)

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