Construct: ORF ccsbBroadEn_10764

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012892.1_s300c1, BRDN0000394803
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CYP11B1 (1584)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1584 CYP11B1 cytochrome P450 family 11 s... NM_000497.3 87.5% 87.6% (many diffs)
2 human 1585 CYP11B2 cytochrome P450 family 11 s... NM_000498.3 83.4% 81.7% (many diffs)
3 human 1584 CYP11B1 cytochrome P450 family 11 s... NM_001026213.1 76% 76.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1791
ORF length:
1722
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCACTCAGG GCAAAGGCAG AGGTGTGCAT GGCAGTGCCC TGGCTGTCCC
121TGCAAAGGGC ACAGGCACTG GGCACGAGAG CCGCCCGGGT CCCCAGGACA GTGCTGCCCT
181TTGAAGCCAT GCCCCGGCGT CCAGGCAACA GGTGGCTGAG GCTGCTGCAG ATCTGGAGGG
241AGCAGGGTTA TGAGGACCTG CACCTGGAAG TACACCAGAC CTTCCAGGAA CTGGGGCCCA
301TTTTCAGGTC CCGGCACTCT GCATCCTTTG GAAGATGGGG AAGGAGTGCA GCACGTGCTG
361GTCTGTGGCG CTGCCAGGGC AGGGGATGGT GCAGAGCAAA TCCCAGCTCG CTGCAGAGAG
421GGCAGGACTC AGAGGCACTG AAGTACGATT TGGGAGGAGC AGGCATGGTG TGTGTGATGC
481TGCCGGAGGA CGTGGAGAAG CTGCAACAGG TGGACAGCCT GCATCCCCAC AGGATGAGCC
541TGGAGCCCTG GGTGGCCTAC AGACAACATC GTGGGCACAA ATGTGGCGTG TTCTTGCTGA
601ATGTGGCTGA CAGGGGAAAT TCCTCCCCAC CATTCCCTGG GGGCATCCAT GGAGCCCCCA
661CGCACTCTGG CTGTAGGAAT GGGCCTGAAT GGCGCTTCAA CCGATTGCGG CTGAATCCAG
721AAGTGCTGTC GCCCAACGCT GTGCAGAGGT TCCTCCCGAT GGTGGATGCA GTGGCCAGGG
781ACTTCTCCCA GGCCCTGAAG AAGAAGGTGC TGCAGAACGC CCGGGGGAGC CTGACCCTGG
841ACGTCCAGCC CAGCATCTTC CACTACACCA TAGAAGCCAG CAACTTGGCT CTTTTTGGAG
901AGCGGCTGGG CCTGGTTGGC CACAGCCCCA GTTCTGCCAG CCTGAACTTC CTCCATGCCC
961TGGAGGTCAT GTTCAAATCC ACCGTCCAGC TCATGTTCAT GCCCAGGAGC CTGTCTCGCT
1021GGACCAGCCC CAAGGTGTGG AAGGAGCACT TTGAGGCCTG GGACTGCATC TTCCAGTACG
1081GCGACAACTG TATCCAGAAA ATCTATCAGG AACTGGCCTT CAGCCGCCCT CAACAGTACA
1141CCAGCATCGT GGCGGAGCTC CTGTTGAATG CGGAACTGTC GCCAGATGCC ATCAAGGCCA
1201ACTCTATGGA ACTCACTGCA GGGAGCGTGG ACACGACGGT GTTTCCCTTG CTGATGACGC
1261TCTTTGAGCT GGCTCGGAAC CCCAACGTGC AGCAGGCCCT GCGCCAGGAG AGCCTGGCCG
1321CCGCAGCCAG CATCAGTGAA CATCCCCAGA AGGCAACCAC CGAGCTGCCC TTGCTGCGTG
1381CGGCCCTCAA GGAGACCTTG CGGCTCTACC CTGTGGGTCT GTTTCTGGAG CGAGTGGCGA
1441GCTCAGACTT GGTGCTTCAG AACTACCACA TCCCAGCTGG GACATTGGTG CGCGTGTTCC
1501TCTACTCTCT GGGTCGCAAC CCCGCCTTGT TCCCGAGGCC TGAGCGCTAT AACCCCCAGC
1561GCTGGCTAGA CATCAGGGGC TCCGGCAGGA ACTTCTACCA CGTGCCCTTT GGCTTTGGCA
1621TGCGCCAGTG CCTTGGGCGG CGCCTGGCAG AGGCAGAGAT GCTGCTGCTG CTGCACCATG
1681TGCTGAAACA CCTCCAGGTG GAGACACTAA CCCAAGAGGA CATAAAGATG GTCTACAGCT
1741TCATATTGAG GCCCAGCATG TTCCCCCTCC TCACCTTCAG AGCCATCAAC TTGCCAACTT
1801TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)