Construct: ORF ccsbBroadEn_10944

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000162.1_s300c1, BRDN0000392492
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LASP1 (3927)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3927 LASP1 LIM and SH3 protein 1 NM_006148.4 72.6% 58.2% (many diffs)
2 human 3927 LASP1 LIM and SH3 protein 1 NM_001271608.1 55.7% 35.9% (many diffs)
3 human 3927 LASP1 LIM and SH3 protein 1 NR_073384.2 23.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1035
ORF length:
969
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA CCCCAACTGC GCCCGGTGCG GCAAGATCGT GTATCCCACG GAGAAGGTGA
121ACTGTCTGGA TAAGTTCTGG CATAAAGCAT GCTTCCATTG CGAGACCTGC AAGATGACAC
181TGAACATGAA GAACTACAAG GGCTACGAGA AGAAGCCCTA CTGCAACGCA CACTACCCCA
241AGCAGTCCTT CACCATGGTG GCGGACACCC CGGAAAACCT TCGCCTCAAG CAACAGAGTG
301AGCTCCAGAG TCAGGTGCGC TACAAGGAGG AGTTTGAGAA GAACAAGGGC AAAGGTTTCA
361GCGTAGTGGC AGACACGCCC GAGCTCCAGA GAATCAAGAA GACCCAGGAC CAGATCAGTA
421ACATAAAATA CCATGAGGAG TTTGAGAAGA GCCGCATGGG CCCTAGCGGG GGCGAGGGCA
481TGGAGCCAGA GCGTCGGGAT TCGCAGGACG GCAGCAGCTA CCGGCGGCCC CTGGAGCAGC
541AGCAGCCTCA CCACATCCCG ACCAGTGCCC CGGTTTACCA GCAGCCCCAG CAGCAGCCGG
601TGGCCCAGTC CTATGGTGGC TACAAGGAGC CTGCAGCCCC AGTCTCCATA CAGCGCAGCG
661CCCCCATCTG TCTTCAGCAC ATTCCACGGC ATCGCATCCG TCCTGGGCGT GACCCGTCCA
721TTCTTCAGTG TCTCTGTTTT TTAAAACCTG CGACAGCTTG TGATTCCTAC CCCTCTTCCA
781GCTTCTTTTG CCAACTGAAG CCTTCTTCTG CCACTTCTGC GGGCTCCCTC CTCTGGCAGG
841CTTCCCCCTT GATCGACTTC TTGGTTTTCT CTCTGGATGG AACGGGCATG GGCCTCTCTG
901GGGGAGGGCG AGGCCCGTGG GGCAGGGCTG GAATGGGAGA CCTGTTGGCC TGTGGGCCTC
961ACCTGCCCCT CTGTTCTCTC CCCTCACATC CTCCTGCCCA GCTCCTCACA TACCCACACA
1021TTCCAGGGCT GGGGTGCCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
1081tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)

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