Construct: ORF ccsbBroadEn_11059

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000264.1_s300c1, BRDN0000393504
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DNAJC3 (5611)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5611 DNAJC3 DnaJ heat shock protein fam... XM_011521104.3 37.9% 31.4% (many diffs)
2 human 5611 DNAJC3 DnaJ heat shock protein fam... NM_006260.5 36.4% 30% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
768
ORF length:
702
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGT GGCCCCCGGC TCCGTGACCA GCCGGCTGGG CTCGGTATTC CCCTTCCTGC
121TAGTCCTGGT GGATCTGCAG TACGAAGGTG CTGAATGTGG AGTAAATGCA GATGTTGAGA
181AACATCTTGA ATTGGGCAAG AAATTACTTG CAGCTGGACA GCTAGCTGAT GCTTTATCTC
241AGTTTCATGC TGCCGTAGAT GGTGACCCTG ATAACTATAT TGCTTATTAT CGGAGGGCTA
301CTGTCTTTTT AGCTATGGGC AAATCAAAAG CTGCACTTCC TGATTTAACT AAAGTGATTC
361AATTGAAGAT GGACTTCACT GCAGCAAGAT TACAGAGAGG TCACTTATTA CTCAAACAAG
421GAAAACTTGA TGAAGCAGAA GATGATTTTA AAAAAGTGGT GTTTCCTGTT CCTTCTCTGT
481TGGGACTCCA GCGTTCTCTC CTAGATGATC TATACTTGCT ATTTTGGTTC TTCCTTATGA
541AGAAGGTGAC TTTCAGATGC CTCTCGTCAG CCATCTCTGA ATGCCTTCCT CAGTCTTTAA
601ATTTGATGAA GTTCAATTTG TTGATTTCCT TTTTACTTCT GTGGACTGTG CGTTTGGTGT
661CATGTCTAAG AAGTATTCAC TACGCCGTAG GATCTAAAAC TTTTCTCATA TCTTCTAAAA
721GTTTTATGGT TTTGTGTTTT ATTTTTAAGC CCATAGTCTA TTTGAGTTAC CCAACTTTCT
781TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)