Construct: ORF ccsbBroadEn_11221

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008759.1_s300c1, BRDN0000390928
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WNT9B (7484)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7484 WNT9B Wnt family member 9B NM_001320458.2 99.8% 99.6% 317T>C
2 human 7484 WNT9B Wnt family member 9B NM_003396.3 87.4% 85.1% (many diffs)
3 human 7484 WNT9B Wnt family member 9B XM_011525178.2 80.7% 77.7% (many diffs)
4 mouse 22412 Wnt9b wingless-type MMTV integrat... NM_011719.4 76.2% 77.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1053
ORF length:
987
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCG CCCCCCGCCC GCGCTGGCCC TGGCCGGGCT CTGCCTGCTG GCGCTGCCCG
121CCGCCGCCGC CTCCTACTTC GGCCTGACCG GGCGGGAAGT CCTGACGCCC TTCCCAGGAT
181TGGGCACTGC GGCAGCCCCG GCACAGGGCG GGGCCCACCT GAAGCAGTGT GACCTGCTGA
241AGCTGTCCCG GCGGCAGAAG CAGCTCTGCC GGAGGGAGCC CGGCCTGGCT GAGACCCTGA
301GGGATGCTGC GCACCTCGGC CTGCTTGAGT GCCAGTTTCA GTTCCGGCAT GAGCGCTGGA
361ACTGTAGCCT GGAGGGCAGG ACGGGCCTGC TCAAGAGAGG CTTCAAAGAG ACAGCTTTCC
421TGTACGCGGT GTCCTCTGCC GCCCTCACCC ACACCCTGGC CCGGGCCTGC AGCGCTGGGC
481GCATGGAGCG CTGCACCTGT GATGACTCTC CGGGGCTGGA GAGCCGGCAG GCCTGGCAGT
541GGGGCGTGTG CGGTGACAAC CTCAAGTACA GCACCAAGTT TCTGAGCAAC TTCCTGGGGT
601CCAAGAGAGG AAACAAGGAC CTGCGGGCAC GGGCAGACGC CCACAATACC CACGTGGGCA
661TCAAGGCTGT GAAGAGTGGC CTCAGGACCA CGTGTAAGTG CCATGGCGTA TCAGGCTCCT
721GTGCCGTGCG CACCTGCTGG AAGCAGCTCT CCCCGTTCCG TGAGACGGGC CAGGTGCTGA
781AACTGCGCTA TGACTCGGCT GTCAAGGTGT CCAGTGCCAC CAATGAGGCC TTGGGCCGCC
841TAGAGCTGTG GGCCCCTGCC AGGCAGGGCA GCCTCACCAA AGGCCTGGCC CCAAGGTCTG
901GGGACCTGGT GTACATGGAG GACTCACCCA GCTTCTGCCG GCCCAGCAAG TACTCACCTG
961GCACAGCAGG TTGGAGTGCA GTGGCAAGAT CTCAGCTCAT CACAACCTCC ACCTCCCGGA
1021TTCAAGCGAT TCTCCCGTCT CAGCTGCCTG AGTACCCAAC TTTCTTGTAC AAAGTtggca
1081ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)