Construct: ORF ccsbBroadEn_11254

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014224.1_s300c1, BRDN0000391469
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GPR68 (8111)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8111 GPR68 G protein-coupled receptor 68 XM_005268110.4 92.7% 92.8% (many diffs)
2 human 8111 GPR68 G protein-coupled receptor 68 XM_005268111.3 92.7% 92.8% (many diffs)
3 human 8111 GPR68 G protein-coupled receptor 68 XM_005268112.3 92.7% 92.8% (many diffs)
4 human 8111 GPR68 G protein-coupled receptor 68 XM_006720262.3 92.7% 92.8% (many diffs)
5 human 8111 GPR68 G protein-coupled receptor 68 XM_011537196.2 92.7% 92.8% (many diffs)
6 human 8111 GPR68 G protein-coupled receptor 68 XM_011537197.3 92.7% 92.8% (many diffs)
7 human 8111 GPR68 G protein-coupled receptor 68 XM_011537198.2 92.7% 92.8% (many diffs)
8 human 8111 GPR68 G protein-coupled receptor 68 XM_011537199.2 92.7% 92.8% (many diffs)
9 human 8111 GPR68 G protein-coupled receptor 68 NM_001177676.2 90% 90.1% (many diffs)
10 human 8111 GPR68 G protein-coupled receptor 68 NM_001348437.1 90% 90.1% (many diffs)
11 human 8111 GPR68 G protein-coupled receptor 68 NM_003485.3 90% 90.1% (many diffs)
12 mouse 238377 Gpr68 G protein-coupled receptor 68 XM_017315062.1 82.2% 86.6% (many diffs)
13 mouse 238377 Gpr68 G protein-coupled receptor 68 NM_001177673.1 80% 84.5% (many diffs)
14 mouse 238377 Gpr68 G protein-coupled receptor 68 NM_001177674.1 80% 84.5% (many diffs)
15 mouse 238377 Gpr68 G protein-coupled receptor 68 NM_175493.4 80% 84.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1119
ORF length:
1050
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAGGAGTGTG GCCCCTTCAG GCCCAAAGAT GGGGAACATC ACTGCAGACA
121ACTCCTCGAT GAGCTGTACC ATCGACCATA CCATCCACCA GACGCTGGCC CCGGTGGTCT
181ATGTTACCGT GCTGGTGGTG GGCTTCCCGG CCAACTGCCT GTCCCTCTAC TTCGGCTACC
241TGCAGATCAA GGCCCGGAAC GAGCTGGGCG TGTACCTGTG CAACCTGACG GTGGCCGACC
301TCTTCTACAT CTGCTCGCTG CCCTTCTGGC TGCAGTACGT GCTGCAGCAC GACAACTGGT
361CTCACGGCGA CCTGTCCTGC CAGGTGTGCG GCATCCTCCT GTACGAGAAC ATCTACATCA
421GCGTGGGCTT CCTCTGCTGC ATCTCCGTGG ACCGCTACCT GGCTGTGGCC CATCCCTTCC
481GCTTCCACCA GTTCCGGACC CTGAAGGCGG CCGTCGGCGT CAGCGTGGTC ATCTGGGCCA
541AGGAGCTGCT GACCAGCATC TACTTCCTGA TGCACGAGGA GGTCATCGAG GACGAGAACC
601AGCACCGCGT GTGCTTTGAG CACTACCCCA TCCAGGCATG GCAGCGCGCC ATCAACTACT
661ACCGCTTCCT GGTGGGCTTC CTCTTCCCCA TCTGCCTGCT GCTGGCGTCC TACCAGGGCA
721TCCTGCGCGC CGTGCGCCGG AGCCACGGCA CCCAGAAGAG CCGCAAGGAC CAGATCCAGC
781GGCTGGTGCT CAGCACCGTG GTCATCTTCC TGGCCTGCTT CCTGCCCTAC CACGTGTTGC
841TGCTGGTGCG TAGCGTCTGG GAGGCCAGCT GCGACTTCGC CAAGGGCGTT TTCAACGCCT
901ACCACTTCTC CCTCCTGCTC ACCAGCTTCA ACTGCGTCGC CGACCCCGTG CTCTACTGCT
961TCGTCAGCGA GACCACCCAC CGGGACCTGG CCCGCCTCCG CGGGGCCTGC CTGGCCTTCC
1021TCACCTGCTC CAGGACCGGC CGGGCCAGGG AGGCCTACCC GCTGGGTGCC CCCGAGGCCT
1081CCGGGAAAAG CGGGGCCCAG GGTGAGGAGC CCATAATCTT GCCAACTTTC TTGTACAAAG
1141Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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