Construct: ORF ccsbBroadEn_11310

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010417.1_s300c1, BRDN0000388543
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
INPP4B (8821)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8821 INPP4B inositol polyphosphate-4-ph... XM_017008796.1 5.6% 5.6% (many diffs)
2 human 8821 INPP4B inositol polyphosphate-4-ph... XM_017008795.1 5.6% 5.5% (many diffs)
3 human 8821 INPP4B inositol polyphosphate-4-ph... NM_001101669.2 5.3% 5.3% (many diffs)
4 human 8821 INPP4B inositol polyphosphate-4-ph... NM_003866.3 5.3% 5.3% (many diffs)
5 human 8821 INPP4B inositol polyphosphate-4-ph... XM_024454275.1 5.3% 5.3% (many diffs)
6 human 8821 INPP4B inositol polyphosphate-4-ph... XM_017008794.1 5.3% 5.2% (many diffs)
7 human 8821 INPP4B inositol polyphosphate-4-ph... NM_001331040.1 5.2% 5.2% (many diffs)
8 human 8821 INPP4B inositol polyphosphate-4-ph... XM_024454274.1 5.2% 5.2% (many diffs)
9 human 8821 INPP4B inositol polyphosphate-4-ph... XM_011532391.2 5.2% 5.1% (many diffs)
10 human 8821 INPP4B inositol polyphosphate-4-ph... XM_024454273.1 5.2% 5.1% (many diffs)
11 human 8821 INPP4B inositol polyphosphate-4-ph... XR_001741343.2 5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
225
ORF length:
159
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA AATTAAAGAG GAAGGGGCAT CAGAAGAAGG GCAGCACTTT CTTCCTACAG
121CCCAGGCCAA TGATCCCGGG GACTGTCAGT TCACAAGTAT CCAGAAGACT CCAAATGAAC
181CGCAGTTGGA ATTCATCCTT GATTTGAATC AAGAATTAAG AGATTACCCA ACTTTCTTGT
241ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)