Construct: ORF ccsbBroadEn_11457

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002633.1_s300c1, BRDN0000390568
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AKAP9 (10142)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011654.2 8% 7.9% (many diffs)
2 human 10142 AKAP9 A-kinase anchoring protein 9 XM_024446631.1 8% 7.9% (many diffs)
3 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011653.2 7.9% 7.9% (many diffs)
4 human 10142 AKAP9 A-kinase anchoring protein 9 NM_147185.3 7.9% 7.9% (many diffs)
5 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011652.2 7.9% 7.9% (many diffs)
6 human 10142 AKAP9 A-kinase anchoring protein 9 NM_005751.4 7.9% 7.9% (many diffs)
7 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011651.2 7.9% 7.9% (many diffs)
8 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011650.2 7.9% 7.9% (many diffs)
9 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011649.2 7.9% 7.8% (many diffs)
10 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011648.2 7.9% 7.8% (many diffs)
11 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011647.2 7.9% 7.8% (many diffs)
12 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011646.2 7.9% 7.8% (many diffs)
13 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011644.2 7.8% 7.8% (many diffs)
14 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011643.2 7.8% 7.8% (many diffs)
15 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011642.2 7.8% 7.8% (many diffs)
16 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011645.2 7.3% 7.3% (many diffs)
17 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011655.2 4.7% 4.6% (many diffs)
18 human 10142 AKAP9 A-kinase anchoring protein 9 XM_017011656.2 4.7% 4.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1008
ORF length:
942
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA GGACGAGGAG AGACAGAAGA AGCTGGAGGC CGGCAAAGCC AAGCTTGCCC
121AGTTTCGACA AAGAAAAGCT CAGTCGGATG GGCAGAGTCC TTCCAAGAAG CAGAAAAAAA
181AGAGAAAAAC GTCAAGCAGT AAACATGATG TGTCAGCACA CCATGATTTG AATATTGATC
241AATCACAGTG TAATGAAATG TACATAAATA GTTCTCAGAG AGTAGAATCA ACTGTGATTC
301CTGAATCTAC AATAATGAGA ACTCTACATA GTGGAGAAAT AACCAGTCAT GAGCAGGGCT
361TCTCTGTGGA ACTGGAAAGT GAAATTTCAA CCACAGCAGA TGACTGCAGT TCAGAGGTAA
421ATGGTTGCAG TTTTGTGATG AGAACAGGAA AGCCTACAAA TTTATTAAGG GAAGAAGAAT
481TTGGTGTTGA TGATTCTTAT TCTGAACAAG GAGCACAAGA CAGTCCGACT CATCTAGAGA
541TGATGGAAAG TGAGTTGGCT GGGAAGCAGC ATGAGATTGA AGAGCTAAAC AGAGAGCTGG
601AAGAAATGAG GGTTACCTAT GGGACTGAAG GACTGCAGCA GTTACAAGAA TTTGAAGCTG
661CCATTAAACA AAGAGATGGC ATTATAACCC AGCTCACTGC TAATTTACAA CAAGCAAGAA
721GAGAAAAGGA TGAGACAATG AGAGAATTTT TAGAGTTGAC AGAACAGAGT CAAAAATTAC
781AGATTCAATT TCAGCAATTA CAGGCTAGTG AAACTCTGAG AAACAGCACT CATAGTAGCA
841CAGCTGCAGA CTTACTACAA GCCAAACAAC AGATCCTCAC TCATCAACAG CAGCTTGAAG
901AACAAGACCA CTTATTAGAA GATTATCAGA AAAAGAAAGA AGACTTCACA ATGCAAATTA
961GTTTCTTGCA AGAGAAAATT AAAGTATATG AAATGGTATG TTTATTTTAC CCAACTTTCT
1021TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)