Construct: ORF ccsbBroadEn_11462

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011062.1_s300c1, BRDN0000389469
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CHST4 (10164)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10164 CHST4 carbohydrate sulfotransfera... NM_001166395.2 95.8% 95.8% 1_48del
2 human 10164 CHST4 carbohydrate sulfotransfera... NM_005769.2 95.8% 95.8% 1_48del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1176
ORF length:
1110
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CATCTTGGCT CTATTCTTCC ACATGTACAG CCACAACATC AGCTCCCTGT
121CTATGAAGGC ACAGCCCGAG CGCATGCACG TGCTGGTTCT GTCTTCCTGG CGCTCTGGCT
181CTTCTTTTGT GGGGCAGCTT TTTGGGCAGC ACCCAGATGT TTTCTACCTG ATGGAGCCCG
241CCTGGCACGT GTGGATGACC TTCAAGCAGA GCACCGCCTG GATGCTGCAC ATGGCTGTGC
301GGGATCTGAT ACGGGCCGTC TTCTTGTGCG ACATGAGCGT CTTTGATGCC TACATGGAAC
361CTGGTCCCCG GAGACAGTCC AGCCTCTTTC AGTGGGAGAA CAGCCGGGCC CTGTGTTCTG
421CACCTGCCTG TGACATCATC CCACAAGATG AAATCATCCC CCGGGCTCAC TGCAGGCTCC
481TGTGCAGTCA ACAGCCCTTT GAGGTGGTGG AGAAGGCCTG CCGCTCCTAC AGCCACGTGG
541TGCTCAAGGA GGTGCGCTTC TTCAACCTGC AGTCCCTCTA CCCGCTGCTG AAAGACCCCT
601CCCTCAACCT GCATATCGTG CACCTGGTCC GGGACCCCCG GGCCGTGTTC CGTTCCCGAG
661AACGCACAAA GGGAGATCTC ATGATTGACA GTCGCATTGT GATGGGGCAG CATGAGCAAA
721AACTCAAGAA GGAGGACCAA CCCTACTATG TGATGCAGGT CATCTGCCAA AGCCAGCTGG
781AGATCTACAA GACCATCCAG TCCTTGCCCA AGGCCCTGCA GGAACGCTAC CTGCTTGTGC
841GCTATGAGGA CCTGGCTCGA GCCCCTGTGG CCCAGACTTC CCGAATGTAT GAATTCGTGG
901GATTGGAATT CTTGCCCCAT CTTCAGACCT GGGTGCATAA CATCACCCGA GGCAAGGGCA
961TGGGTGACCA CGCTTTCCAC ACAAATGCCA GGGATGCCCT TAATGTCTCC CAGGCTTGGC
1021GCTGGTCTTT GCCCTATGAA AAGGTTTCTC GACTTCAGAA AGCCTGTGGC GATGCCATGA
1081ATTTGCTGGG CTACCGCCAC GTCAGATCTG AACAAGAACA GAGAAACCTG TTGCTGGATC
1141TTCTGTCTAC CTGGACTGTC CCTGAGCAAA TCCACTACCC AACTTTCTTG TACAAAGTtg
1201gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)