Construct: ORF ccsbBroadEn_11503

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013838.1_s300c1, BRDN0000394876
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MERTK (10461)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10461 MERTK MER proto-oncogene, tyrosin... NM_006343.3 82.2% 82.1% (many diffs)
2 mouse 17289 Mertk c-mer proto-oncogene tyrosi... NM_008587.2 69.3% 70.5% (many diffs)
3 mouse 17289 Mertk c-mer proto-oncogene tyrosi... XM_006498860.3 68.5% 69.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2538
ORF length:
2469
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAAATAAAC AATGAAGAGA TCGTGTCTGA TCCCATCTAC ATCGAAGTAC
121AAGGACTTCC TCACTTTACT AAGCAGCCTG AGAGCATGAA TGTCACCAGA AACACAGCCT
181TCAACCTCAC CTGTCAGGCT GTGGGCCCGC CTGAGCCCGT CAACATTTTC TGGGTTCAAA
241ACAGTAGCCG TGTTAACGAA CAGCCTGAAA AATCCCCCTC CGTGCTAACT GTTCCAGGCC
301TGACGGAGAT GGCGGTCTTC AGTTGTGAGG CCCACAATGA CAAAGGGCTG ACCGTGTCCA
361AGGGAGTGCA GATCAACATC AAAGCAATTC CCTCCCCACC AACTGAAGTC AGCATCCGTA
421ACAGCACTGC ACACAGCATT CTGATCTCCT GGGTTCCTGG TTTTGATGGA TACTCCCCGT
481TCAGGAATTG CAGCATTCAG GTCAAGGAAG CTGATCCGCT GAGTAATGGC TCAGTCATGA
541TTTTTAACAC CTCTGCCTTA CCACATCTGT ACCAAATCAA GCAGCTGCAA GCCCTGGCTA
601ATTACAGCAT TGGTGTTTCC TGCATGAATG AAATAGGCTG GTCTGCAGTG AGCCCTTGGA
661TTCTAGCCAG CACGACTGAA GGAGCCCCAT CAGTAGCACC TTTAAATGTC ACTGTGTTTC
721TGAATGAATC TAGTGATAAT GTGGACATCA GATGGATGAA GCCTCCGACT AAGCAGCAGG
781ATGGAGAACT GGTGGGCTAC CGGATATCCC ACGTGTGGCA GAGTGCAGGG ATTTCCAAAG
841AGCTCTTGGA GGAAGTTGGC CAGAATGGCA GCCGAGCTCG GATCTCTGTT CAAGTCCACA
901ATGCTACGTG CACAGTGAGG ATTGCAGCCG TCACCAAAGG GGGAGTTGGG CCCTTCAGTG
961ATCCAGTGAA AATATTTATC CCTGCACACG GTTGGGTAGA TTATGCCCCC TCTTCAACTC
1021CGGCGCCTGG CAACGCAGAT CCTGTGCTCA TCATCTTTGG CTGCTTTTGT GGATTTATTT
1081TGATTGGGTT GGTTTTATAC ATCTCCTTGG CCATCAGAAA AAGAGTCCAG GAGACAAAGT
1141TTGGGAATGC ATTCACAGAG GAGGATTCTG AATTAGTGGT GAATTATATA GCAAAGAAAT
1201CCTTCTGTCG GCGAGCCATT GAACTTACCT TACATAGCTT GGGAGTCAGT GAGGAACTAC
1261AAAATAAACT AGAAGATGTT GTGATTGACA GGAATCTTCT AATTCTTGGA AAAATTCTGG
1321GTGAAGGAGA GTTTGGGTCT GTAATGGAAG GAAATCTTAA GCAGGAAGAT GGGACCTCTC
1381TGAAAGTGGC AGTGAAGACC ATGAAGTTGG ACAACTCTTC GCAGCGGGAG ATCGAGGAGT
1441TTCTCAGTGA GGCAGCGTGC ATGAAAGACT TCAGCCACCC AAATGTCATT CGACTTCTAG
1501GTGTGTGTAT AGAAATGAGC TCTCAAGGCA TCCCAAAGCC CATGGTAATT TTACCCTTCA
1561TGAAATACGG GGACCTGCAT ACTTACTTAC TTTATTCCCG ATTGGAGACA GGACCAAAGC
1621ATATTCCTCT GCAGACACTA TTGAAGTTCA TGGTGGATAT TGCCCTGGGA ATGGAGTATC
1681TGAGCAACAG GAATTTTCTT CATCGAGATT TAGCTGCTCG AAACTGCATG TTGCGAGATG
1741ACATGACTGT CTGTGTTGCG GACTTCGGCC TCTCTAAGAA GATTTACAGT GGCGATTATT
1801ACCGCCAAGG CCGCATTGCT AAGATGCCTG TTAAATGGAT CGCCATAGAA AGTCTTGCAG
1861ACCGAGTCTA CACAAGTAAA AGTGATGTGT GGGCATTTGG CGTGACCATG TGGGAAATAG
1921CTACGCGGGG AATGACTCCC TATCCTGGGG TCCAGAACCA TGAGATGTAT GACTATCTTC
1981TCCATGGCCA CAGGTTGAAG CAGCCCGAAG ACTGCCTGGA TGAACTGTAT GAAATAATGT
2041ACTCTTGCTG GAGAACCGAT CCCTTAGACC GCCCCACCTT TTCAGTATTG AGGCTGCAGC
2101TAGAAAAACT CTTAGAAAGT TTGCCTGACG TTCGGAACCA AGCAGACGTT ATTTACGTCA
2161ATACACAGTT GCTGGAGAGC TCTGAGGGCC TGGCCCAGGG CTCCACCCTT GCTCCACTGG
2221ACTTGAACAT CGACCCTGAC TCTATAATTG CCTCCTGCAC TCCCCGCGCT GCCATCAGTG
2281TGGTCACAGC AGAAGTTCAT GACAGCAAAC CTCATGAAGG ACGGTACATC CTGAATGGGG
2341GCAGTGAGGA ATGGGAAGAT CTGACTTCTG CCCCCTCTGC TGCAGTCACA GCTGAAAAGA
2401ACAGTGTTTT ACCGGGGGAG AGACTTGTTA GGAATGGGGT CTCCTGGTCC CATTCGAGCA
2461TGCTGCCCTT GGGAAGCTCA TTGCCCGATG AACTTTTGTT TGCTGACGAC TCCTCAGAAG
2521GCTCAGAAGT CCTGATGTTG CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
2581gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)