Construct: ORF ccsbBroadEn_11533

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008093.1_s300c1, BRDN0000390175
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RAD51AP1 (10635)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10635 RAD51AP1 RAD51 associated protein 1 NM_006479.5 79% 79.1% 1_210del;618T>C
2 human 10635 RAD51AP1 RAD51 associated protein 1 NM_001130862.2 75.1% 75.2% 1_261del;669T>C
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
861
ORF length:
795
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TTTAGATGAC AAGCTCTACC AGAGAGACTT AGAAGTTGCA CTAGCTTTAT
121CAGTGAAGGA ACTTCCAACA GTCACCACTA ATGTGCAGAA CTCTCAAGAT AAAAGCATTG
181AAAAACATGG CAGTAGTAAA ATAGAAACAA TGAATAAGTC TCCTCATATC TCTAATTGCA
241GTGTAGCCAG TGATTATTTA GATTTGGATA AGATTACTGT GGAAGATGAT GTTGGTGGTG
301TTCAAGGGAA AAGAAAAGCA GCATCTAAAG CTGCAGCACA GCAGAGGAAG ATTCTTCTGG
361AAGGCAGTGA TGGTGATAGT GCTAATGACA CTGAACCAGA CTTTGCACCT GGTGAAGATT
421CTGAGGATGA TTCTGATTTT TGTGAGAGTG AGGATAATGA CGAAGACTTC TCCATGAGAA
481AAAGTAAAGT TAAAGAAATT AAAAAGAAAG AAGTGAAGGT AAAATCCCCA GTAGAAAAGA
541AAGAGAAGAA ATCTAAATCC AAATGTAATG CTTTGGTGAC TTCGGTGGAC TCTGCTCCAG
601CTGCCGTCAA ATCAGAATCT CAGTCCTTGC CAAAAAAGGT TTCTCTGTCT TCAGATACCA
661CTAGGAAACC ATTAGAAATA CGCAGTCCTT CAGCTGAAAG CAAGAAACCT AAATGGGTCC
721CACCAGCGGC ATCTGGAGGT AGCAGAAGTA GCAGCAGCCC ACTGGTGGTA GTGTCTGTGA
781AGTCTCCCAA TCAGAGTCTC CGCCTTGGCT TGTCCAGATT AGCACGAGTT AAACCTTTGC
841ATCCAAATGC CACTAGCACC TGCCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
901attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)