Construct: ORF ccsbBroadEn_11635

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017959.1_s300c1, BRDN0000457450
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD26 (22852)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22852 ANKRD26 ankyrin repeat domain 26 NM_014915.2 95.3% 95.3% 737_738ins147;1363_1461del
2 human 22852 ANKRD26 ankyrin repeat domain 26 NM_001256053.1 95.2% 95.2% 737_738ins147;1363_1461del;1811_1812insTAG
3 human 22852 ANKRD26 ankyrin repeat domain 26 XM_006717423.2 79% 79% 737_738ins147;1363_1461del;1634_2719del
4 human 22852 ANKRD26 ankyrin repeat domain 26 XM_011519416.2 77.4% 76.7% (many diffs)
5 human 22852 ANKRD26 ankyrin repeat domain 26 XM_017015930.1 77.4% 76.7% (many diffs)
6 human 22852 ANKRD26 ankyrin repeat domain 26 XM_017015931.1 77.4% 76.7% (many diffs)
7 human 22852 ANKRD26 ankyrin repeat domain 26 XM_006717425.4 77% 76.9% (many diffs)
8 human 22852 ANKRD26 ankyrin repeat domain 26 XM_017015932.1 77% 76.9% (many diffs)
9 human 22852 ANKRD26 ankyrin repeat domain 26 XM_017015929.1 76.7% 76.2% (many diffs)
10 human 22852 ANKRD26 ankyrin repeat domain 26 XM_017015928.1 76.6% 76% (many diffs)
11 human 22852 ANKRD26 ankyrin repeat domain 26 XM_017015933.1 58.9% 58.3% (many diffs)
12 human 22852 ANKRD26 ankyrin repeat domain 26 XM_024447896.1 46.8% 29.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
5247
ORF length:
5178
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAGAAGATT TTTAGTAAGA AGGGCGAGTC GCCCTTGGGC TCCTTCGCGC
121GGCGGCAGAG GAGCAGCGCG GGAGGCGGGG GCGAGCCGGG GGAGGGCGCC TACTCGCAGC
181CCGGCTACCA CGTCCGAGAC CGAGATCTCG GCAAGATCCA CAAAGCTGCC AGCGCGGGTA
241ATGTGGCGAA AGTGCAGCAG ATCCTTTTGC TCAGGAAGAA TGGCTTGAAC GATAGAGACA
301AGATGAACAG GACGGCTCTA CATTTGGCCT GTGCCAATGG TCATCCAGAA GTAGTAACTC
361TCCTGGTGGA CAGAAAATGC CAGCTCAATG TCTGTGACAA CGAAAACAGG ACAGCTCTGA
421TGAAGGCTGT ACAATGCCAG GAAGAGAAAT GTGCAACTAT TCTGCTAGAA CATGGTGCTG
481ATCCAAATCT TGCGGATGTC CATGGCAACA CTGCTCTTCA CTATGCTGTC TATAATGAGG
541ACATATCAGT AGCAACAAAG CTGCTTTTGT ATGATGCAAA TATTGAAGCA AAAAACAAGG
601ATGACCTCAC ACCACTTTTA CTTGCAGTAA GTGGAAAAAA GCAGCAAATG GTGGAATTTT
661TAATAAAGAA AAAAGCAAAT GTAAATGCAG TAGATAAGTT GGAAAGCAGT CACCAACTAA
721TTTCAGAATA TAAAGAAGAA AGGATACCTA AACATTCTTC TCAAAATAGT AATTCAGTGG
781ATGAAAGCTC TGAAGACTCC TTAAGCAGTT TATTTTATTT TATTTTTTTT GAGGCAAAGT
841CTTGCACTGT TGCCCAGGCT GGAGTGCTAC AGCATGATCT CGGCTCACTG CAATCTCTGC
901TTCCTGGGTT CACACAATTC TTCTGCCTCC ACCTCCCAAG TAGCTGGGAC CACAGGCTTT
961CTGGCAAACC GGGTGTTGAT GATTCATGGC CTACCTCAGA TGACGAAGAC CTCAATTTTG
1021ATACTAAGAA TGTCCCAAAA CCAAGCTTAG CAAAGCTAAT GACTGCTTCT CAGCAATCCA
1081GGAAAAATTT AGAAGCAACA TATGGCACTG TGAGAACAGG AAATAGAACT TTGTTTGAGG
1141ATAGAGATTC CGATAGTCAA GATGAAGTTG TGGTTGAAAG CCTTCCTACA ACATCAATCA
1201AAGTCCAGTG CTTTTCTCAT CCTACCTATC AATCACCTGA CCTTCTTCCA AAACCTTCCC
1261ACAAGTCGTT AGCAAACCCT GGTCTTATGA AGGAAGAACC AACAAAGCCA GGCATTGCAA
1321AAAAAGAAAA TGGTATTGAT ATTATTGAAA GTGCTCCACT AGAGCAAACA AATAATGACA
1381ATTTGACTTA TGTTGATGAA GTGCACAAAA ATAATAGAAG TGATATGATG TCCGCATTAG
1441GATTAGGACA AGAGGAAGAT ATAGAATCAC CTTGGGATTC TGAGAGTATC TCTGAGAATT
1501TTCCACAGAA GTATGTTGAT CCTTTAGCTG GGGCTGCAGA CGGAAAAGAA AAAAATATAG
1561GAAATGAACA AGCAGAAGAG TCTCCTGAGA GATATCTTCA CTTGAAGCCT ACCATTGAAA
1621TGAAAGATTC TGTTCCAAAT AAAGCAGGAG GAATGAAGGA TGTACAAACA TCCAAAGCAG
1681CTGAACATGA CTTAGAAGTA GCATCAGAAG AAGAGCAAGA AAGGGAAGGG AGTGAAAATA
1741ACCAGCCACA GGTTGAAGAA GAAAGGAAAA AACACAGAAA TAATGAAATG GAAGTATCAG
1801CAAACATACA TGATGGTGCT ACTGATGATG CTGAAGATGA TGATGATGAT GATGGATTAA
1861TTCAAAAAAG AAAGAGTGGA GAAACTGATC ATCAGCAATT TCCCAGGAAG GAAAATAAAG
1921AGTATGCTAG TAGTGGTCCT GCCTTGCAAA TGAAGGAAGT AAAGAGCACT GAAAAAGAAA
1981AACGGACCTC GAAAGAATCT GTGAATTCAC CAGTGTTTGG GAAGGCCAGT TTACTAACTG
2041GTGGCCTGCT ACAAGTGGAT GATGACAGCA GTTTAAGTGA AATAGATGAG GATGAAGGAA
2101GGCCTACTAA GAAAACATCT AATGAAAAGA ACAAGGTCAA AAACCAAATA CAGTCTATGG
2161ATGATGTTGA TGACTTAACT CAGTCATCTG AAACAGCCTC AGAGGATTGT GAGCTACCCC
2221ACTCTAGTTA CAAGAATTTT ATGTTGCTCA TTGAACAACT TGGAATGGAG TGTAAAGATT
2281CTGTTAGCCT ATTGAAAATC CAGGATGCAG CTCTTTCATG TGAAAGATTA TTAGAACTTA
2341AAAAAAATCA CTGTGAACTA CTTACAGTAA AAATTAAAAA AATGGAAGAC AAGGTTAATG
2401TACTACAAAG GGAGCTATCT GAAACAAAAG AAATAAAATC ACAGTTAGAG CATCAAAAAG
2461TTGAATGGGA ACGAGAACTG TGCTCTTTGA GATTTAGCTT AAACCAAGAA GAAGAGAAGA
2521GAAGAAATGC TGATACGTTG TATGAAAAAA TTAGGGAACA GTTAAGAAGA AAAGAAGAGC
2581AATATAGGAA AGAAGTTGAA GTGAAACAAC AGCTTGAACT GAGTCTCCAA ACACTGGAGA
2641TGGAATTGAG GACTGTAAAA AGTAATTTGA ATCAGGTCGT TCAAGAGCGA AATGACGCTC
2701AGAGGCAACT TTCTCGAGAA CAGAATGCCA GAATGTTACA AGATGGAATT CTGACCAATC
2761ACCTTTCCAA ACAAAAGGAG ATTGAAATGG CTCAAAAGAA AATGAATTCT GAGAATTCTC
2821ATAGTCATGA AGAAGAAAAA GACCTATCGC ATAAAAATAG CATGTTGCAG GAAGAAATTG
2881CTATGCTAAG ACTAGAAATA GACACAATAA AAAATCAAAA CCAGGAAAAA GAAAAGAAAT
2941GTTTTGAGGA CCTTAAAATT GTAAAAGAAA AGAATGAAGA CCTTCAGAAG ACTATAAAAC
3001AGAATGAGGA AACATTAACA CAAACAATAT CCCAGTATAA TGGACGGCTT AGTGTTCTGA
3061CAGCTGAGAA TGCAATGCTA AATTCTAAAC TGGAGAATGA AAAGCAAAGC AAGGAAAGAC
3121TGGAAGCAGA AGTTGAATCA TACCATTCTA GATTGGCTGC TGCTATACAT GATCGTGATC
3181AAAGTGAGAC ATCAAAAAGA GAACTAGAAC TTGCTTTCCA GAGAGCAAGA GATGAATGTT
3241CTCGTTTACA GGACAAAATG AATTTTGATG TGTCTAACCT AAAAGATAAC AATGAGATTC
3301TTTCTCAACA ACTATTTAAA ACTGAAAGTA AACTCAATAG CCTAGAAATT GAGTTCCATC
3361ACACGAGAGA TGCCCTCAGA GAAAAGACTT TGGGTTTAGA ACGGGTACAA AAGGACCTAA
3421GCCAAACACA GTGTCAAATG AAGGAAATGG AACAAAAGTA TCAAAATGAA CAAGTTAAAG
3481TGAATAAATA CATTGGAAAG CAGGAGTCTG TAGAGGAGAG ATTGTCTCAA CTACAAAGTG
3541AGAATATGTT GCTTCGACAA CAACTGGATG ATGCCCACAA CAAGGCTGAC AATAAAGAGA
3601AGACAGTGAT TAATATCCAA GACCAGTTTC ATGCTATTGT GCAAAAACTT CAAGCTGAGA
3661GTGAAAAGCA AAGTCTTCTG CTAGAAGAAA GAAATAAGGA GTTAATCAGT GAATGTAATC
3721ACTTAAAAGA AAGACAGTAT CAATATGAAA ATGAAAAGGC AGAAAGAGAA GTTGTTGTGA
3781GACAACTTCA ACAAGAACTA GCTGATACCC TAAAAAAACA ATCTATGTCA GAGGCTTCAC
3841TGGAGGTTAC GTCACGTTAT CGTATTAATT TAGAAGATGA GACACAGGAT TTAAAGAAGA
3901AATTAGGTCA AATCAGAAAT CAATTGCAAG AAGCACAGGA TCGACATACA GAAGCTGTCA
3961GATGTGCTGA GAAGATGCAA GATCACAAGC AAAAGCTTGA AAAAGATAAT GCCAAGTTAA
4021AAGTTACAGT CAAAAAGCAA ATGGACAAAA TTGAGGAGCT TCAGAAAAAC CTGTTAAATG
4081CAAATTTGTC TGAAGATGAA AAGGAACAAT TAAAGAAACT TATGGAATTA AAACAGTCAC
4141TGGAATGTAA TTTGGATCAA GAAATGAAGA AAAATGTTGA ATTAGAAAGA GAGATAACTG
4201GATTTAAGAA CCTCTTAAAA ATGACAAGAA AGAAGTTAAA TGAATATGAA AATGGAGAAT
4261TTAGTTTCCA TGGAGATTTA AAAACTAGTC AATTTGAAAT GGATATTCAG ATTAATAAGC
4321TAAAACATAA GATTGATGAT CTTACAGCAG AACTGGAGAC TGCAGGTTCA AAATGTCTAC
4381ATCTGGATAC AAAGAACCAA ATTCTTCAAG AGGAGTTGTT ATCTATGAAA ACAGTACAAA
4441AGAAATGTGA AAAACTACAG AAGAATAAAA AGAAGTTGGA ACAAGAAGTG ATCAACCTGA
4501GAAGTCATAT AGAAAGGAAT ATGGTAGAAC TTGGTCAAGT CAAACAGTAT AAACAGGAGA
4561TTGAAGAAAG AGCAAGACAG GAAATAGCAG AAAAATTAAA AGAAGTCAAT CTATTTTTAC
4621AGGCACAAGC AGCATCTCAA GAAAACTTAG AGCAGTTTAG AGAGAATAAT TTTGCTTCAA
4681TGAAAAGTCA GATGGAACTC AGAATTAAAG ATCTGGAATC TGAACTCTCC AAAATAAAAA
4741CTTCTCAAGA AGACTTTAAT AAAACCGAAC TGGAAAAATA TAAGCAACTC TATCTAGAAG
4801AATTAAAAGT TAGAAAATCT TTGTCAAGTA AACTAACCAA AACTAATGAG AGGCTAGCAG
4861AGGTCAACAC CAAACTTCTT GTGGAAAAAC AGCAGAGCAG ATCTTTGTTC ACCACTCTCA
4921CTACCAGGCC AGTCATGGAG CCACCTTGTG TGGGAAATCT TAATAATAGT TTAGATCTCA
4981ACAGAAAACT TATTCCAAGA GAAAACTTAG TGATCTCTAC CTCAAATCCA CGGGCTTCAA
5041ATAATAGCAT GGAGAACTAC TTGAGCAAGA TGCAGCAGGA GTTGGAAAAA AATATAACTA
5101GAGAACTCAA AGAAGCTGCT GCTGAATTGG AATCTGGATC AATAGCTTCC CCTCTAGGGT
5161CTACTGATGA GTCAAATCTA AATCAAGATC TAGTTTGGAA AGCATCAAGA GAATATGTAC
5221AGGTTTTAAA GAAAAATTAT ATGATCTTGC CAACTTTCTT GTACAAAGTT GGcattataa
5281gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)

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