Construct: ORF ccsbBroadEn_12179

Construct Description:

• Construct Type: ORF
• Other Identifiers: ORF012087.1_s300c1, BRDN0000396343
• DNA Barcode: None
• Epitope Tag: None
• Notes: No stop codon in insert

Originally Annotated References:

• Gene: DZANK1 (55184)

Vector Information:

• Vector Backbone: pDONR223
• Pol II Cassette 1: n/a
• Pol II Cassette 2: n/a
• Selection Marker: n/a
• Visible Reporter: n/a
• Epitope Tag: n/a

Current transcripts matched by this ORF:

	Taxon	Gene	Symbol	Description	Transcript	Nuc. Match %	Prot. Match %	Match Diffs
1	human	55184	DZANK1	double zinc ribbon and anky...	NR_160274.1	41.7%		(many diffs)
2	human	55184	DZANK1	double zinc ribbon and anky...	NR_160273.1	41.2%		(many diffs)
3	human	55184	DZANK1	double zinc ribbon and anky...	NM_001099407.1	32.7%	23.8%	(many diffs)
4	human	55184	DZANK1	double zinc ribbon and anky...	NM_001367611.1	32.4%	23.6%	(many diffs)
5	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027915.2	32.4%	23.6%	(many diffs)
6	human	55184	DZANK1	double zinc ribbon and anky...	NM_001367612.1	32.2%	23.5%	(many diffs)
7	human	55184	DZANK1	double zinc ribbon and anky...	NM_001367613.1	32.2%	23.5%	(many diffs)
8	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027913.2	31.9%	23.3%	(many diffs)
9	human	55184	DZANK1	double zinc ribbon and anky...	NM_001351684.2	31.9%	23.4%	(many diffs)
10	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027912.2	31.7%	23.1%	(many diffs)
11	human	55184	DZANK1	double zinc ribbon and anky...	NM_001367614.1	31.6%	23.2%	(many diffs)
12	human	55184	DZANK1	double zinc ribbon and anky...	NM_001367617.1	31.6%	23.2%	(many diffs)
13	human	55184	DZANK1	double zinc ribbon and anky...	NM_001367618.1	31.6%	23.2%	(many diffs)
14	human	55184	DZANK1	double zinc ribbon and anky...	XM_011529271.3	31.6%	23.2%	(many diffs)
15	human	55184	DZANK1	double zinc ribbon and anky...	XM_011529272.2	31.6%	23.2%	(many diffs)
16	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027910.1	31.6%	23.2%	(many diffs)
17	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027911.1	31.6%	23.2%	(many diffs)
18	human	55184	DZANK1	double zinc ribbon and anky...	NM_001351683.2	31.5%	23.1%	(many diffs)
19	human	55184	DZANK1	double zinc ribbon and anky...	XM_011529268.2	31.2%	22.9%	(many diffs)
20	human	55184	DZANK1	double zinc ribbon and anky...	XM_006723584.2	28.1%	28.5%	(many diffs)
21	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027916.2	27.6%	28.1%	(many diffs)
22	human	55184	DZANK1	double zinc ribbon and anky...	XM_024451934.1	18.5%	5.7%	(many diffs)
23	human	55184	DZANK1	double zinc ribbon and anky...	NM_001367619.1	17.4%	5.7%	(many diffs)
24	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027918.2	17.2%	5.7%	(many diffs)
25	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027919.2	17.2%	5.7%	(many diffs)
26	human	55184	DZANK1	double zinc ribbon and anky...	XR_001754314.2	16%		(many diffs)
27	human	55184	DZANK1	double zinc ribbon and anky...	NM_018152.3	13.1%	3.6%	0_1ins451;282T>C;291_1755del
28	human	55184	DZANK1	double zinc ribbon and anky...	XM_017027920.2	13.1%	3.6%	0_1ins451;282T>C;291_1755del
29	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_006499516.3	33%	21.2%	(many diffs)
30	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_006499515.3	31%	20%	(many diffs)
31	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_006499514.3	29.4%	19%	(many diffs)
32	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_011239534.2	28.8%	18.6%	(many diffs)
33	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_011239533.2	28.3%	20.4%	(many diffs)
34	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_006499512.3	27.8%	18%	(many diffs)
35	mouse	241688	Dzank1	double zinc ribbon and anky...	NM_172859.2	27.8%	18%	(many diffs)
36	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_011239532.2	27.3%	17.7%	(many diffs)
37	mouse	241688	Dzank1	double zinc ribbon and anky...	XM_006499511.3	27.3%	17.7%	(many diffs)

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:

66

ORF end:

807

ORF length:

741

Sequence:

1	gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61	TTGGCATGAC TGCTGGTTCA GTGTGTGTCC CTCAGATCAT ACCACTACGA GTGCCTCAGC
121	CTGGAAAAGC TAACCATGAA ATTGATAACA ATACGCTTTT GGAAATGAAA TCAGACACTC
181	CAGATGTCAA CATATATTAT ACTCTGGATG GCAGCAAACC TGAATTTCTA AAGAGAATTG
241	GTTATGGGGA AAATAACACA TTTAAGTATA TAAAACCTAT TACTCTGCCT GATGGAAAAA
301	TACAAGTTAA AGCTATTGCT GTCTCTAAAG ACTGCAGACA GAGTGGCATT GCGACAAAGG
361	TGTTTCACGT AGACTATGAA CCACCAAATA TAGTCTCTCC TGAAGACAAT GTTGAAAATG
421	TTCTCAAAGA TTCTTCAAGG CAGGAATTCA AAAATGGATT TGTTGGATCA AAACTAAAGA
481	AAAAATATAA GAACTCTGAA AATCAACGCA GCTGGAATGT TAACCTTAGA AAGTTTCCAG
541	TCCCCCGGTT TTGCACACGT AAGCGGTCAG AAGTGTTTGA CAAGCACGGA GATAATGAGA
601	ATTCAAAGGG AGACAGACTT TCTCAAGTGT GCCCACTGCC TTGCCCCCCG GCCATCAGAT
661	CCCTTTGCTC GCTTCTGTCA AGAATGTGGC TCTCCTGTCC CACCCATATT TGGCTGTCGT
721	CTCCCACCCC CAGAAGGAGC TCAGATGGGC TTGTGTGCAG AATGCAGAAG CTTGGTACCC
781	ATGAACACTC CCATCTGCGT GGTGTGTGCC CAACTTTCTT GTACAAAGTt ggcattataa
841	gaaagcattg cttatcaatt tgttgcaacg aac

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