Construct: ORF ccsbBroadEn_12242

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003062.1_s300c1, BRDN0000395663
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNF126 (55658)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55658 RNF126 ring finger protein 126 NM_194460.3 94.9% 94.4% (many diffs)
2 human 55658 RNF126 ring finger protein 126 NM_001366018.1 86.7% 86.1% (many diffs)
3 human 376412 RNF126P1 ring finger protein 126 pse... NR_002818.2 60.7% (many diffs)
4 human 55658 RNF126 ring finger protein 126 XR_002958330.1 38.4% (many diffs)
5 mouse 70294 Rnf126 ring finger protein 126 NM_144528.3 82.5% 88.4% (many diffs)
6 mouse 70294 Rnf126 ring finger protein 126 XM_017314081.1 75.6% 69.5% (many diffs)
7 mouse 70294 Rnf126 ring finger protein 126 XM_006514075.3 70.2% 53.9% (many diffs)
8 mouse 70294 Rnf126 ring finger protein 126 XR_001779593.1 48.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1044
ORF length:
978
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CGAGGCGTCG CCGCATCCCG GACGGTACTT CTGCCACTGC TGCTCCGTGG
121AGATCGTCCC GCGCCTGCCG GATTATATCT GTCCAAGATG CGAGTCTGGT TTTATCGAGG
181AGCTTCCGGA AGAGACCAGG AGCACAGAAA ATGGTTCTGC CCCCTCCACA GCTCCCACAG
241ACCAGAGCCG GCCACCGTTG GAGCACGTGG ACCAGCACCT GTTCACGCTG CCGCAGGGCT
301ACGGACAGTT TGCTTTCGGC ATCTTCGATG ACAGCTTCGA GATCCCCACG TTCCCTCCTG
361GGGCGCAGGC TGACGACGGC AGGGACCCTG AGAGCCGGCG GGAGAGAGAC CATCCGTCCC
421GGCACCGGTA CGGCGCCCGA CAGCCCCGCG CCCGCCTCAC CACGCGGCGG GCCACCGGCC
481GGCACGAAGG CGTCCCCACG CTGGAAGGGA TCATCCAGCA GCTCGTCAAC GGCATCATCA
541CGCCCGCCAC CATCCCCAGC CTGGGCCCCT GGGGAGTCCT GCACTCAAAC CCTATGGACT
601ACGCCTGGGG GGCCAACGGC CTGGATGCCA TCATCACACA GCTCCTCAAT CAGTTTGAAA
661ACACAGGCCC CCCACCGGCA GATAAAGAGA AAATCCAGGC CCTCCCCACC GTCCCCGTCA
721CTGAGGAGCA CGTAGGCTCC GGGCTCGAGT GCCCTGTGTG CAAGGACGAC TACGCGCTGG
781GTGAGCGTGT GCGGCAGCTG CCCTGCAACC ACCTGTTCCA CGACGGCTGC ATCGTGCCCT
841GGCTGGAGCA GCACGACAGC TGCCCCGTCT GCCGAAAAAG CCTCACGGGA CAGAACACGG
901CCACGAACCC CCCTGGCCTC ACTGGGGTGA GCTTCTCCTC CTCGTCGTCA TCGTCCTCCT
961CCAGCTCGCC CAGCAACGAG AACGCCACAT GGTCCCCTCT GGGGCGTCCC CAGCCTCCCC
1021GTCCTCTGTC TAACCTCACC CTCTACCCAA CTTTCTTGTA CAAAGTtggc attataagaa
1081agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)