Construct: ORF ccsbBroadEn_12274

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005115.1_s300c1, BRDN0000390591
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF415 (55786)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55786 ZNF415 zinc finger protein 415 NM_001352147.1 100% 100%
2 human 55786 ZNF415 zinc finger protein 415 NM_001352148.1 100% 100%
3 human 55786 ZNF415 zinc finger protein 415 NM_001352149.1 100% 100%
4 human 55786 ZNF415 zinc finger protein 415 XM_006723279.1 100% 100%
5 human 55786 ZNF415 zinc finger protein 415 XM_017026968.1 100% 100%
6 human 55786 ZNF415 zinc finger protein 415 XM_017026969.1 95.5% 92.7% (many diffs)
7 human 55786 ZNF415 zinc finger protein 415 NM_001136038.3 95.2% 92.9% (many diffs)
8 human 55786 ZNF415 zinc finger protein 415 NM_001352142.1 95.2% 92.9% (many diffs)
9 human 55786 ZNF415 zinc finger protein 415 NM_001352143.1 95.2% 92.9% (many diffs)
10 human 55786 ZNF415 zinc finger protein 415 NM_001352144.1 95.2% 92.9% (many diffs)
11 human 55786 ZNF415 zinc finger protein 415 NM_001164309.2 94.9% 92.9% (many diffs)
12 human 55786 ZNF415 zinc finger protein 415 NM_001352146.1 94.9% 92.9% (many diffs)
13 human 55786 ZNF415 zinc finger protein 415 NM_018355.3 94.9% 92.9% (many diffs)
14 human 55786 ZNF415 zinc finger protein 415 XM_017026964.1 94.9% 92.9% (many diffs)
15 human 55786 ZNF415 zinc finger protein 415 XM_017026971.1 92.9% 92.9% 94_216del
16 human 55786 ZNF415 zinc finger protein 415 XM_024451601.1 92.9% 92.9% 94_216del
17 human 55786 ZNF415 zinc finger protein 415 NM_001352138.1 92.6% 88.9% (many diffs)
18 human 55786 ZNF415 zinc finger protein 415 NM_001352139.1 92.6% 88.9% (many diffs)
19 human 55786 ZNF415 zinc finger protein 415 NM_001352140.1 92.6% 88.9% (many diffs)
20 human 55786 ZNF415 zinc finger protein 415 NM_001352141.1 92.6% 88.9% (many diffs)
21 human 55786 ZNF415 zinc finger protein 415 XM_017026970.1 92.6% 88.9% (many diffs)
22 human 55786 ZNF415 zinc finger protein 415 NM_001352136.1 91.7% 91.7% 1_147del
23 human 55786 ZNF415 zinc finger protein 415 NM_001352137.1 91.7% 91.7% 1_147del
24 human 55786 ZNF415 zinc finger protein 415 XM_011527101.2 91.7% 91.7% 1_147del
25 human 55786 ZNF415 zinc finger protein 415 XM_017026961.1 91.3% 87.2% 1_55del;149_246del
26 human 55786 ZNF415 zinc finger protein 415 NM_001330766.1 89.8% 85.7% 1_85del;179_276del
27 human 55786 ZNF415 zinc finger protein 415 NM_001352132.1 89.8% 85.7% 1_85del;179_276del
28 human 55786 ZNF415 zinc finger protein 415 NM_001352133.1 89.8% 85.7% 1_85del;179_276del
29 human 55786 ZNF415 zinc finger protein 415 NM_001352134.1 89.8% 85.7% 1_85del;179_276del
30 human 55786 ZNF415 zinc finger protein 415 XM_017026956.1 89.8% 85.7% 1_85del;179_276del
31 human 55786 ZNF415 zinc finger protein 415 XM_017026957.1 89.8% 85.7% 1_85del;179_276del
32 human 55786 ZNF415 zinc finger protein 415 XM_017026960.1 89.8% 85.7% 1_85del;179_276del
33 human 55786 ZNF415 zinc finger protein 415 NM_001352135.1 88.5% 85.8% (many diffs)
34 human 55786 ZNF415 zinc finger protein 415 NM_001352130.1 85.7% 85.7% 1_147del;241_363del
35 human 55786 ZNF415 zinc finger protein 415 NM_001352131.1 85.7% 85.7% 1_147del;241_363del
36 human 55786 ZNF415 zinc finger protein 415 XM_006723267.1 85.7% 85.7% 1_147del;241_363del
37 human 55786 ZNF415 zinc finger protein 415 XM_024451596.1 85.7% 85.7% 1_147del;241_363del
38 human 55786 ZNF415 zinc finger protein 415 XM_024451597.1 85.7% 85.7% 1_147del;241_363del
39 human 55786 ZNF415 zinc finger protein 415 XM_024451598.1 85.7% 85.7% 1_147del;241_363del
40 human 55786 ZNF415 zinc finger protein 415 XM_024451599.1 85.7% 85.7% 1_147del;241_363del
41 human 55786 ZNF415 zinc finger protein 415 XM_024451600.1 85.7% 85.7% 1_147del;241_363del
42 human 55786 ZNF415 zinc finger protein 415 XM_024451595.1 79.9% 79.9% 1_285del;379_501del
43 human 55786 ZNF415 zinc finger protein 415 NM_001330759.1 59.9% 59.9% 0_1ins651
44 human 55786 ZNF415 zinc finger protein 415 NM_001352150.1 59.9% 59.9% 0_1ins651
45 human 55786 ZNF415 zinc finger protein 415 NM_001352151.1 59.9% 59.9% 0_1ins651
46 human 55786 ZNF415 zinc finger protein 415 XM_006723280.3 59.9% 59.9% 0_1ins651
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1692
ORF length:
1626
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTG GGAGCACAGG AAAGAGCCCT GGACCATAGA AAGCCAAGTA CGAGTAGCAA
121GAAAACCAAA AGGGTGGGAA TGGATCAAAG GTGTGAAAAC AGATCTGTCT CGTAACTGTG
181TAATCAAGGA ACTAGCACCA CAACAGGAAG GTAACCCAGG AGAAGTATTC CACACAGTGA
241CATTGGAACA ACATGAAAAA CATGACATTG AAGAGTTTTG CTTCAGGGAA ATCAAGAAAA
301AAATACACGA CTTTGACTGT CAGTGGAGAG ATGATGAAAG AAATTGCAAC AAAGTGACTA
361CGGCCCCAAA AGAAAATCTT ACTTGTAGGA GAGACCAACG CGATAGAAGA GGTATAGGAA
421ACAAGTCTAT TAAACATCAG CTTGGATTAA GCTTTCTACC ACATCCCCAT GAACTGCAGC
481AGTTTCAAGC TGAAGGGAAA ATTTATGAAT GTAACCATGT TGAGAAGTCT GTCAACCATG
541GTTCCTCAGT TTCACCACCC CAAATAATTT CTTCTACCAT CAAAACCCAT GTTTCTAATA
601AATATGGGAC TGATTTCATC TGTTCTTCAT TACTCACACA AGAACAGAAA TCATGCATTA
661GGGAAAAACC TTACAGATAT ATTGAGTGCG ACAAAGCCTT GAATCATGGC TCACACATGA
721CTGTACGTCA GGTAAGTCAT TCTGGAGAGA AAGGATATAA ATGTGATCTG TGTGGCAAGG
781TCTTTAGTCA AAAATCAAAC CTTGCGCGTC ATTGGAGAGT TCATACTGGA GAGAAACCAT
841ACAAATGTAA TGAATGTGAC AGAAGTTTCA GTCGCAACTC ATGCCTTGCA CTACATCGGA
901GAGTTCACAC TGGAGAGAAA CCTTACAAAT GTTATGAGTG TGACAAGGTC TTCAGTCGAA
961ATTCATGCCT TGCACTACAT CAGAAAACTC ATATTGGAGA GAAACCTTAC ACATGTAAAG
1021AGTGTGGCAA AGCCTTTAGT GTGAGGTCAA CACTTACCAA CCATCAGGTA ATTCATAGTG
1081GCAAGAAACC TTACAAATGC AATGAATGTG GCAAGGTGTT CAGTCAGACT TCAAGCCTTG
1141CAACTCATCA GAGAATTCAC ACTGGGGAGA AACCATACAA GTGTAATGAA TGTGGTAAAG
1201TCTTCAGTCA GACTTCAAGC CTTGCAAGGC ATTGGAGAAT TCATACTGGA GAGAAACCTT
1261ACAAATGCAA TGAATGTGGT AAGGTTTTCA GTTACAATTC ACACCTTGCG AGTCATCGGA
1321GAGTTCATAC TGGAGAGAAA CCTTACAAGT GTAATGAGTG TGGGAAAGCC TTTAGTGTGC
1381ATTCGAACTT AACTACCCAT CAGGTCATCC ATACTGGAGA GAAGCCTTAC AAATGTAATC
1441AATGTGGCAA AGGCTTCAGT GTGCATTCAA GCCTAACTAC CCATCAGGTC ATCCATACTG
1501GAGAAAAACC TTACAAATGT AATGAGTGTG GCAAATCCTT TAGTGTGCGC CCAAACCTCA
1561CTAGACATCA GATAATCCAT ACTGGAAAGA AACCTTACAA ATGTAGTGAT TGTGGGAAGT
1621CCTTTAGTGT GCGCCCAAAC CTCTTCAGAC ATCAAATTAT CCATACTAAG GAGAAACCTT
1681ATAAAAGAAA TTACCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1741caatttgttg caacgaac

Download FASTA (ORF) (Full)

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