Construct: ORF ccsbBroadEn_12348

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015181.1_s300c1, BRDN0000394189
DNA Barcode:
None
Epitope Tag:
None
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
CNOT6 (57472)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57472 CNOT6 CCR4-NOT transcription comp... XR_001742164.1 4.5% 1_3880del;4157_6028del
2 human 57472 CNOT6 CCR4-NOT transcription comp... NR_163438.1 4.5% 1_3916del;4193_6064del
3 human 57472 CNOT6 CCR4-NOT transcription comp... NR_163437.1 4.3% 1_4175del;4452_6323del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
67
ORF end:
343
ORF length:
276
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaaG
61TTGGTAATGT GCATCATGAC AATTTCCAGT GAAGGTGAGC TGGAGCTGGT TGGACTAATG
121AGACTGAGGA AGCAGCTTTT CCTACGATCT GCATTATGTA ATCACAGGTC CAGAGAGCTT
181TATGGAAGCG GGAGAGGAGG AGCACTTACT CATGTTGTAT TTGTTAATGG AGGATGTCAT
241CTTTTCATAG ATGCTGGAAC TAGAGTGCAC TTGTTAGATG CTAAAGGTTT GAGCTTTACA
301CAAAATGTCT TCATCTGTAT TTGTTATTGT CTACAATATA TTTGAccaac tttcttgtac
361aaagttggca ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)