Construct: ORF ccsbBroadEn_12367

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008111.1_s300c1, BRDN0000389926
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGAP20 (57569)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57569 ARHGAP20 Rho GTPase activating prote... XM_005271628.3 99% 99% (many diffs)
2 human 57569 ARHGAP20 Rho GTPase activating prote... NM_001258417.1 62.9% 62.9% (many diffs)
3 human 57569 ARHGAP20 Rho GTPase activating prote... NM_001258418.1 62.9% 62.9% (many diffs)
4 human 57569 ARHGAP20 Rho GTPase activating prote... NM_001258416.1 62.4% 62.4% (many diffs)
5 human 57569 ARHGAP20 Rho GTPase activating prote... NM_001258415.2 62.2% 62.2% (many diffs)
6 human 57569 ARHGAP20 Rho GTPase activating prote... NM_020809.3 61% 61% (many diffs)
7 human 57569 ARHGAP20 Rho GTPase activating prote... XM_006718893.3 61% 61% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2259
ORF length:
2193
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA TCAAGGAAAT GATGAAGAGA AAATAAATAC TGTTCAAAGG CTATTAGACC
121AGCTTCCGAG AGCCAATGTT GTTCTCCTAA GGTATCTTTT TGGGGTGTTA CACAACATTG
181AGCAACATTC CTCATCCAAT CAGATGACTG CATTTAATTT AGCTGTGTGT GTCGCTCCAA
241GTATTCTTTG GCCTCCTGCT TCCTCCAGCC CAGAACTAGA AAACGAATTT ACAAAAAAGG
301TTTCCCTGCT TATACAATTT CTGATTGAGA ATTGCCTTAG GATATTTGGA GAAGAAATCA
361CTTCCCTCTT CAGAGAGGTT TCAGTGAGAT GTGACACTAG AGAGAATGCC TCAGATATTT
421CTTGCTTTCA ACTGAATGAC TCCTCCTATG ACAGCTTGGA AAATGAGCTA AATGAGGATG
481TTGATGCACC ATGCAGTGAC TTGGTAAAGA AACTTGGCCA GGGGAGCAGA AGCATGGACT
541CTGTCTTAAC CCTCAGTGAC TATGATCTTG ACCAGCCCGA GGTGGAAGAC CTTTTAACCC
601TAAGCGACTT TGACTTGGCC CATTCTAAAG ATGAAGATGT TCAAATGAAA CGGCCTCTTG
661AATCCAAGCC GGTGAACATT TTAGTGTACA CAAAGATCCC ACTGCGGGAT CATGCCAGGG
721CCCCATCTGC CATGTGCACA CCCAGCTACC TGTCCACAGC TGCAGCAAAT GCTGCAAAAA
781GCCTGAGGCG ACACCGGCGT TGCTCAGAGC CCAGCATCGA CTATCTGGAT TCAAAGCTTT
841CCTACCTCAG GGAGTTTTAT CAGAAAAAGC TACGCAAGTC CAGCTGTGAT GCAATTCTTT
901CTCAAAAAGA TGAAGACTAT CTGAAGCAGA ATCAACCCCT CCAGGAGGAA GGAAAGACAT
961GTTTTAAACA GAGTTTAGTC ACAGGCACTG ATGTCAGCAA GAAAAATGCC ACTACTCAAA
1021ACACTAAGAA GAAAAGCTTG TCTGGTAGTG AAGGAAATCA CGTGAAACTT TTCCCTAAGT
1081CTAAGCCAGT GGCCATTTCT GTGGCATCTT ATAGTCCTAT GTCCTCACAG GATCATTCCA
1141AGAACCAGCC CTTTGATGTG AATACATCTG GATACTCCCC ACCACACACA GCAGATGCCC
1201TCAAGGGTCC AAGGACACAT CGGCGCTGCT CAGAGCCCAA CATAGAAGAC CAGAACCGCA
1261AGCTGACCTA TCTCAGGGGA ATTTATTCAA AGAAACAACA TAAAACCAGC TGTGAAGCTG
1321GTCTCTTGCA TGGAGAGGAG GATTATCTCA AACGGCATAA GTCTTTGCAA ATGGAGGGGC
1381AGAAGCTCAT TAATCAGAGT TTAGTCATGG GGATTGAGGT GGGCAAGAGT AGTGCCACAA
1441ACCAAAACAC TGAGAAGGTT TTACCCCCAA GATTAAACCT TTGCCCAAGG ACCAGCTATT
1501CCAGCTTATC CTCCCCAGGC ACTTCCCCAT CCGGCTCATC AGTAAGCTCC CAAGACAGTG
1561CTTTTTCTCA GATTTCTGAA CACTCTGTGT TTACACCCAC TGAGACTTCC TCTCCAATAG
1621ATTGCACTTT TCAGGCTCAG AGAAAACGGG AAGACCTTTC TCCTGACTTT AGCAATGCCA
1681GCCATGTTTC CGGAATGCCC GGTCCCTCAT CAGGGCAGGC TTGCAGCCGC CCAGCCTATA
1741CAAAGAAGGA CACCATGGAG TGGCATTCAC AAATGCATTC TGTAACTCTT CATCCCAGCA
1801CATGGTTGAG AAATGGTGTG GCCAGTTTGA AAAACTGGTC CCTCAAAAAG AAAGCAAAGG
1861CAGCCAGACC AGAGGAAGAG AAAATAGCTT CTCCAAAAGG ACCCTTAGAG CCACCCCCAC
1921ATGCTTCTGG TGTTCCAGAA GCCAACTCAC TGCAAGAGGA ACAAAAAGAC TTGCCCTTAA
1981GGGCAGCTGA AGGACTGTCC CCTGTGCAGT CAGCCCAAAG GTGTAGTTCT TCTCCCTTCC
2041AGGACTCAGA GAGACACTGT AGCTCTCCAT TCAGCCTGGT GGAGAGCAGA CTTAAGCTGT
2101GCATGAAGTC ACATGAGGAA ATAGAGCCTG GTAGTCAGAG CTCTTCTGGT TCTCTGCCTT
2161GGGAAAGAGC CTCAGCCAGC TCTTGGACTC TAGAGGATGC GACCAGCCCA GACTCAGGGC
2221CTACAGTGGT CTGCGACATT GAGGACAGAA ACTGCTGCTA CCCAACTTTC TTGTACAAAG
2281Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)

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