Construct: ORF ccsbBroadEn_12727

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000836.1_s300c1, BRDN0000390348
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADAMTS12 (81792)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 81792 ADAMTS12 ADAM metallopeptidase with ... NM_001324511.2 98.7% 98.7% 688_696delTTGTTTTAT
2 human 81792 ADAMTS12 ADAM metallopeptidase with ... NM_001324512.2 14.6% 14.2% (many diffs)
3 human 81792 ADAMTS12 ADAM metallopeptidase with ... NM_030955.4 13.8% 13.4% (many diffs)
4 human 81792 ADAMTS12 ADAM metallopeptidase with ... XM_017009905.1 13.5% 13.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
753
ORF length:
687
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC ATGTGCCCAG AGGAGCTGGC TTGCAAACCT TTCCGTGGTG GCTCAGCTCC
121TTAACTTTGG GGCGCTTTGC TATGGGAGAC AGCCTCAGCC AGGCCCGGTT CGCTTCCCGG
181ACAGGAGGCA AGAGCATTTT ATCAAGGGCC TGCCAGAATA CCACGTGGTG GGTCCAGTCC
241GAGTAGATGC CAGTGGGCAT TTTTTGTCAT ATGGCTTGCA CTATCCCATC ACGAGCAGCA
301GGAGGAAGAG AGATTTGGAT GGCTCAGAGG ACTGGGTGTA CTACAGAATT TCTCACGAGG
361AGAAGGACCT GTTTTTTAAC TTGACGGTCA ATCAAGGATT TCTTTCCAAT AGCTACATCA
421TGGAGAAGAG ATATGGGAAC CTCTCCCATG TTAAGATGAT GGCTTCCTCT GCCCCCCTCT
481GCCATCTCAG TGGCACGGTT CTACAGCAGG GCACCAGAGT TGGGACGGCA GCCCTCAGTG
541CCTGCCATGG ACTGACTGGA TTTTTCCAAC TACCACATGG AGACTTTTTC ATTGAACCCG
601TGAAGAAGCA TCCACTGGTT GAGGGAGGGT ACCACCCGCA CATCGTTTAC AGGAGGCAGA
661AAGTTCCAGA AACCAAGGAG CCAACCTGTG GATTAAAGGG TATTGTGACT CACATGTCCT
721CCTGGGTTGA AGAATCTGTT TTGTTCTTTT GGTACCCAAC TTTCTTGTAC AAAGTtggca
781ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)