Construct: ORF ccsbBroadEn_12884

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013709.1_s300c1, BRDN0000392277
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
C8orf76 (84933)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 100533106 ZHX1-C8orf76 ZHX1-C8orf76 readthrough NM_001204180.2 100% 100%
2 human 84933 C8orf76 chromosome 8 open reading f... NM_032847.3 75.7% 73% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
942
ORF length:
876
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCT AAGGAAGCTG TGGCAATGGT TTTATGAAGA AACAGAAAGC AGTGATGATG
121TTGAAGTGCT GACTCTCAAG AAATTCAAAG GAGACCTGGC CTACAGACGA CAAGAGTATC
181AGAAAGCACT GCAGGAGTAT TCCAGTATCT CTGAAAAATT GTCATCAACC AATTTTGCCA
241TGAAAAGGGA TGTCCAGGAA GGTCAGGCTC GGTGTCTGGC TCACCTGGGT AGGCATATGG
301AGGCGCTGGA GATTGCTGCA AACTTGGAAA ATAAAGCAAC CAACACAGAC CATTTAACCA
361CGGTACTCTA CCTCCAGCTT GCTATTTGTT CAAGTTTGCA GAACTTGGAG AAAACAATTT
421TCTGCCTGCA GAAACTGATT TCTTTGCATC CTTTTAATCC TTGGAACTGG GGCAAATTGG
481CAGAGGCTTA CCTGAATCTG GGGCCAGCTC TTTCAGCAGC ACTTGCGTCA TCTCAGAAAC
541AGCACAGTTT CACCTCAAGT GACAAAACTA TCAAATCCTT CTTTCCACAC TCAGGAAAAG
601ACTGTCTTTT GTGTTTTCCT GAAACCTTGC CTGAGAGCTC TTTATTTTCT GTGGAAGCGA
661ATAGCAGTAA TAGCCAGAAA AATGAGAAAG CTCTGACAAA TATCCAAAAC TGTATGGCAG
721AAAAGAGAGA AACAGTGTTG ATAGAGACTC AGCTGAAAGC ATGTGCCTCT TTTATACGAA
781CCAGGCTTCT GCTTCAGTTT ACCCAACCTC AGCAAACATC GTTTGCTTTG GAGAGGAACT
841TAAGGACTCA GCAGGAAATT GAAGATAAAA TGAAAGGGTT CAGCTTCAAA GAAGACACTT
901TGCTGTTGAT AGCTGAGGTG AGTGTATCCC TCGGGTTTAT GTGCCCAACT TTCTTGTACA
961AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)

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