Construct: ORF ccsbBroadEn_12903

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005307.1_s300c1, BRDN0000389676
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM241 (85019)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 85019 TMEM241 transmembrane protein 241 NR_148382.1 7.6% 1_819del;1042_2899del
2 human 85019 TMEM241 transmembrane protein 241 NR_134876.1 7.6% 1_815del;1038_2900del
3 human 85019 TMEM241 transmembrane protein 241 NR_148384.1 7.5% 1_848del;1071_2928del
4 human 85019 TMEM241 transmembrane protein 241 NR_148385.1 7.5% 1_862del;1085_2942del
5 human 85019 TMEM241 transmembrane protein 241 NR_148383.1 7.4% 1_897del;1120_2977del
6 human 85019 TMEM241 transmembrane protein 241 NR_134875.1 7.4% 1_895del;1118_2989del
7 human 85019 TMEM241 transmembrane protein 241 NR_134877.1 7.4% 1_898del;1121_2992del
8 human 85019 TMEM241 transmembrane protein 241 XR_001753289.1 5.5% 1_934del;1157_3972del
9 human 85019 TMEM241 transmembrane protein 241 XR_001753290.2 4% 1_801del;1024_5419del
10 human 85019 TMEM241 transmembrane protein 241 XR_001753291.1 4% 1_768del;991_5467del
11 human 85019 TMEM241 transmembrane protein 241 XR_001753288.1 3.9% 1_934del;1157_5552del
12 human 85019 TMEM241 transmembrane protein 241 XR_001753293.1 3.9% 1_998del;1221_5616del
13 human 85019 TMEM241 transmembrane protein 241 XR_001753292.2 3.9% 1_1042del;1265_5660del
14 human 85019 TMEM241 transmembrane protein 241 XR_001753287.1 3.8% 1_1074del;1297_5773del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
288
ORF length:
222
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC TCCTGCTCGG TGCGCTTGGA GAGGCCTTGC TGGTTTTCTC AGAGCGGAAG
121AGCTCCTGAA CAAGACGGTC AAGAGAAAGA CTCACAGGCT GCTGCGGGAG AACAGCTTGT
181ACACCTGTGT ACGAGCCCCT GGTCTCATAG CTCCCTGTTG GATGTGTCAG AAAGAGGAAT
241GCAAGGACAG TGAGGCCAGG TGGGCAGTGC CATCACCCTC ACCCAAGTGC CCAACTTTCT
301TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)