Construct: ORF ccsbBroadEn_13249

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005721.1_s300c1, BRDN0000398146
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
C1orf127 (148345)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 148345 C1orf127 chromosome 1 open reading f... NM_001366227.1 94.6% 94.7% (many diffs)
2 human 148345 C1orf127 chromosome 1 open reading f... XM_017000373.1 82.2% 82.3% (many diffs)
3 human 148345 C1orf127 chromosome 1 open reading f... NM_001170754.1 78.6% 78.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2013
ORF length:
1944
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GAAGTGTCCG ATGCTAAGGT CAAGGCTGGG CCAGGAAAGC GTCCACTGTG
121GGCCCATGTT CATCCAGGTC TCCCGGCCCC TGCCCCTGTG GAGGGACAAT AGACAGACTC
181CATGGCTGCT GTCCCTTCGA GGGGAGCTGG TGGCTTCTCT TGAAGACGCC AGCCTGATGG
241GACTGTATGT GGACATGAAT GCCACCACTG TCACCGTCCA AAGCCCGAGA CAAGGCCTTC
301TTCAGAGGTG GGAGGTGCTG AACACCTCTG CTGAGCTCCT GCCACTATGG CTGGTGAGCG
361GTCACCATGC CTATTCTTTA GAAGCTGCTT GCCCACCGGT GTCATTCCAG CCAGAGTCGG
421AGGTCTTAGT TCACATCCCC AAGCAGAGAC TGGGTCTAGT CAAAAGAGGT TCCTACATTG
481AGGAAACCCT GAGCCTCAGA TTCCTCCGAG TCCACCAGTC CAACATCTTT ATGGTGACTG
541AGAACAAGGA CTTTGTGGTG GTCAGCATTC CGGCGGCCGG GGTGCTCCAG GTCCAGCGAT
601GCCAAGAAGT CGGAGGAACC CCGGGAACAC AAGCTTTCTA TAGGGTAGAC CTGAGCCTGG
661AATTTGCCGA GATGGCTGCC CCGGTCCTCT GGACAGTGGA GAGCTTCTTC CAGTGTGTGG
721GTTCAGGAAC AGAGTCGCCT GCCTCAACTG CTGCACTGAG GACCACTCCC TCCCCACCAT
781CCCCAGGACC AGAGACCCCT CCAGCGGGAG TGCCACCTGC TGCTTCCTCC CAGAAGGGGC
841TTGGACCATT CCTGCAAACA GCCAAACCGG CGAGAAGAGG CCAGACATCT GCCTCCATTC
901TCCCCAGAGT GGTGCAAGCT CAGCGAGGTC CCCAGCCTCC CCCAGGGGAA GCAGGGATCC
961CTGGACACCC CACACCTCCA GCCACGCTCC CCTCGGAGCC TGTAGAGGGT GTCCAGGCTA
1021GTCCCTGGCG GCCACGTCCA GTCTTGCCAA CGCACCCGGC TCTGACCCTG CCCGTGTCCT
1081CAGATGCCTC CTCTCCTTCA CCGCCAGCCC CGAGGCCTGA ACGACCTGAA TCACTTCTGG
1141TCTCAGGACC ATCTGTCACC CTGACTGAAG GTCTAGGAAC TGTGAGGCCT GAACAGGACC
1201CCGCCAAGTC TCCAGGAAGT CCCCTCCTGC TGAGAGGCTT GTCAAGCGGG GATGTGGCTG
1261CACCTGAGCC CATCATGGGG GAGCCCGGCC AAGCCAGTGA GGAGTTCCAG CCATTGGCGA
1321GGCCCTGGCG GGCCACACTG GCTGCAGAGG AGCTGGTTTC TCACCGTTCT CCCGGAGAGC
1381CCCAGGAAAC GTGCTCTGGA ACGGAGGTGG AGAGGCCACG CCAGACAGGG CCTGGTCTCC
1441CCAGGGAGGG GGCCAGGGGG CACATGGACC TTTCATCCTC AGAACCAAGC CAGGACATAG
1501AGGGGCCGGG ACTCTCCATC CTGCCAGCGA GGGATGCCAC ATTCTCCACC CCAAGTGTGA
1561GGCAGCCAGA CCCCAGTGCC TGGCTGAGTT CAGGACCTGA ACTCACCGGG ATGCCCAGGG
1621TGAGGCTGGC AGCGCCCCTG GCAGTTCTTC CTATGGAACC TCTGCCACCA GAACCTGTTC
1681GCCCAGCAGC TCTTCTGACA CCCGAAGCCT CATCTGTGGG AGGGCCAGAC CAGGCCCGAT
1741ACCTGGAGTC AGCCCCTGGC TGGCCCGTGG GCCAGGAGGA GTGGGGGGTT GCACACACGT
1801CCAGCCCTCC ATCCACGCAA ACCCTGAGCC TGTGGGCTCC CACAGGAGTG TTGCTACCCA
1861GCCTGGTGGA GCTTGAATAC CCCTTCCAGG CTGGTCGGGG GGCCTCACTC CAGCAGGAGC
1921TGACAGAGCC CACCTTGGCC CTCAGTGCTG AAAGCCACAG GCCTCCTGAG CTTCAAGACA
1981GTGTGGAGGG GCTTTCTGAG AGGCCCTCAC GCTTGCCAAC TTTCTTGTAC AAAGTtggca
2041ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)