Construct: ORF ccsbBroadEn_13354

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003848.1_s300c1, BRDN0000389932
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OLFML2A (169611)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 169611 OLFML2A olfactomedin like 2A NM_001282715.1 99.9% 99.7% 283A>G
2 human 169611 OLFML2A olfactomedin like 2A XM_006716989.2 69.9% 69.8% (many diffs)
3 human 169611 OLFML2A olfactomedin like 2A NM_182487.4 66% 65.9% (many diffs)
4 human 169611 OLFML2A olfactomedin like 2A XM_005251760.5 53.4% 53.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1380
ORF length:
1314
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TAAGAGAGAC AAGGCTGGGA AGGACACAGC TAGAGGAAAA GGCAAGGACA
121TCAGCAAGTA TGGCAGTGTG CAGAAAAGCT TTGCAGACAG AGGCCTCCCA AAACCTCCCA
181AGGAGAAGCT GCTTCAGGTG GAGAAGCTGA GAAAGGAGAG CGGCAAGGGC AGTTTCCTCC
241AGCCCACAGC CAAGCCCCGC GCCCTGGCCC AGCAGCAGGC TGTGATCCGG GGCTTCACCT
301ACTACAAGGC AGGCAAGCAG GAGGTGACCG AGGCGGTGGC AGACAACGCC CTCCAGGGCA
361CTTCCTGGCT GGAGCAACTG CCGCCCAAGG TGGAGGGCAG GTCCAACTCC GCAGAGCCCA
421ACTCCGCAGA GCAGGATGAG GCTGAGCCCA GGTCCTCCGA GCGAGTGGAC CTGGCTTCTG
481GCACCCCCAC TTCAATCCCT GCCACCACCA CCACCGCCAC CACCACCCCA ACCCCCACCA
541CCAGTCTCCT GCCCACCGAG CCACCTTCAG GTCCAGAAGT CTCCAGCCAA GGCAGAGAGG
601CGAGCTGTGA GGGCACCCTC CGGGCTGTGG ACCCCCCTGT GAGGCACCAC AGCTATGGGC
661GCCACGAGGG AGCCTGGATG AAGGACCCTG CAGCTCGAGA CGACAGGATC TATGTCACCA
721ACTACTACTA TGGAAACAGC CTGGTGGAGT TCCGCAACCT GGAAAACTTC AAGCAAGGCC
781GCTGGAGTAA CATGTACAAG CTACCCTACA ACTGGATCGG CACAGGCCAC GTGGTGTACC
841AGGGCGCCTT CTACTACAAC CGCGCCTTCA CCAAGAACAT CATCAAGTAC GACCTACGGC
901AGCGCTTCGT GGCCTCCTGG GCGCTGCTGC CCGACGTGGT ATATGAGGAC ACCACACCTT
961GGAAGTGGCG CGGACACTCG GACATTGACT TTGCCGTGGA CGAGAGCGGC CTGTGGGTCA
1021TCTACCCCGC CGTGGACGAC CGCGATGAGG CCCAGCCCGA GGTGATCGTC CTGAGTCGCT
1081TGGACCCCGG CGATCTCTCC GTGCACCGGG AGACCACGTG GAAGACACGG CTGCGGCGGA
1141ACTCCTACGG GAACTGCTTC CTGGTGTGCG GCATCCTGTA TGCCGTGGAC ACGTACAACC
1201AGCAGGAAGG CCAGGTCGCC TACGCTTTCG ACACGCACAC GGGCACCGAC GCACGCCCCC
1261AGCTGCCGTT CCTCAACGAG CACGCCTACA CCACCCAGAT CGACTACAAC CCCAAGGAGC
1321GGGTGCTGTA CGCCTGGGAC AATGGCCACC AGCTCACCTA CACCCTCCAC TTCGTGGTCT
1381GCCCAACTTT CTTGTACAAA GTtggcatta taagaaagca ttgcttatca atttgttgca
1441acgaac

Download FASTA (ORF) (Full)